RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SLC9A5Q14940 896 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 SLC8B1Q6J4K2 584 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 UNQ6126/PRO20091Q6UXV3 157 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 DEF8Q6ZN54 512 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 OR10A6Q8NH74 314 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 SNX33Q8WV41 574 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 SLC41A3Q96GZ6 507 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 ZBTB45Q96K62 511 aaPredicted RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 P2RX7Q99572 595 aaKnown RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 PIP5K1AQ99755 562 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 ADAM2Q99965 735 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 TBCDQ9BTW9 1192 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 ABCG2Q9UNQ0 655 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 MCIDASD6RGH6 385 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 GOT2P00505 430 aaKnown RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 PCGF2P35227 344 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 CPSF6Q16630 551 aaKnown RBP eCLIP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 GGTA1PQ4G0N0 100 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 SLC27A4Q6P1M0 643 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TMPRSS11BQ86T26 416 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 OR13J1Q8NGT2 312 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 HMX1Q9NP08 348 aaPredicted RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 MLXQ9UH92 298 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TCRBV3S1A0A5B6 114 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 CASTOR2A6NHX0 329 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 OR5K4A6NMS3 321 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 H7C2Y5 167 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 KCNA5P22460 613 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 GRK6P43250 576 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 IRF4Q15306 451 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 VMACQ2NL98 169 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 PITRM1Q5JRX3 1037 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 LRRC56Q8IYG6 542 aaPredicted RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 CAMKK1Q8N5S9 505 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TCEAL4Q96EI5 215 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 SLC35G5Q96KT7 338 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 SLCO5A1Q9H2Y9 848 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 ELAC1Q9H777 363 aaKnown RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 SDHAF3Q9NRP4 125 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 NPEPPSL1A6NEC2 478 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 KRT33AO76009 404 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 BMP8BP34820 402 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 DSTNP60981 165 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 PUDPQ08623 228 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 NKAPLQ5M9Q1 402 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 BMP8AQ7Z5Y6 402 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 PCED1BQ96HM7 432 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 ATRXP46100 2492 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 ZNF623O75123 536 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TPH1P17752 444 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TAS2R31P59538 309 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 ADAM17P78536 824 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 ANKDD1AQ495B1 522 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 ARHGAP11AQ6P4F7 1023 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TLDC1Q6P9B6 456 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 DOK6Q6PKX4 331 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 FTMTQ8N4E7 242 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 KIAA1958Q8N8K9 716 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 KDM1BQ8NB78 822 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TFAP2CQ92754 450 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 CDKN2AIPNLQ96HQ2 116 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 AIFM2Q9BRQ8 373 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 NUAK1O60285 661 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 PHC1P78364 1004 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 PERM1Q5SV97 790 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 NPNTQ6UXI9 565 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 DENND1CQ8IV53 801 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 RPLP0P6Q8NHW5 317 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TMEM168Q9H0V1 697 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TMEM181Q9P2C4 612 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 DLX3O60479 287 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 SPATA31D3P0C874 917 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 CSNK2A2P19784 350 aaPredicted RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 ACVR2AP27037 513 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 MAGEA3P43357 314 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 SLX4IPQ5VYV7 408 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 SPATA31D4Q6ZUB0 917 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 UBE2Q1Q7Z7E8 422 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 PTRH1Q86Y79 214 aaKnown RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 STX12Q86Y82 276 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 NPAS4Q8IUM7 802 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 MKKSQ9NPJ1 570 aaPredicted RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TAS2R9Q9NYW1 312 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 KLHL21Q9UJP4 597 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 NENFQ9UMX5 172 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 STRCP1A6NGW2 1772 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 DPEP1P16444 411 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 HOXD13P35453 343 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TARBP2Q15633 366 aaKnown RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 ZNF678Q5SXM1 525 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 ARHGAP12Q8IWW6 846 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 CENPSQ8N2Z9 138 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 LIX1Q8N485 282 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 EGFL7Q9UHF1 273 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 KLK4Q9Y5K2 254 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 GREB1Q4ZG55 1949 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 LRRC14BA6NHZ5 514 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 HSPB2A8KAH6 182 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 CA12O43570 354 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 PRAMEF11O60813 436 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms