RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TRNAU1APQ9NX07 287 aaKnown RBP15.47■□□□□ 0.07
USP42-201ENST00000306177 CFL2Q9Y281 166 aa15.47■□□□□ 0.07
USP42-201ENST00000306177 CD1DP15813 335 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 ZNF3P17036 446 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 CSTF2P33240 577 aaKnown RBP eCLIP15.46■□□□□ 0.07
USP42-201ENST00000306177 RORCP51449 518 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 ENPP2Q13822 863 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 ZFP69Q49AA0 526 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 CLEC12AQ5QGZ9 265 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 RHEBL1Q8TAI7 183 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 GRHL3Q8TE85 626 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 STON2Q8WXE9 905 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 LRIG1Q96JA1 1093 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 HSH2DQ96JZ2 352 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 RIMKLBQ9ULI2 386 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 SPIN1Q9Y657 262 aaPredicted RBP15.46■□□□□ 0.07
USP42-201ENST00000306177 SLC22A1O15245 554 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 OR1I1O60431 355 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 ALDOAP04075 364 aaKnown RBP15.46■□□□□ 0.07
USP42-201ENST00000306177 IQCF3P0C7M6 154 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 AGTR2P50052 363 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 ALDH3A2P51648 485 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 KIAA1161Q6NSJ0 714 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 TICAM1Q8IUC6 712 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 ZSWIM3Q96MP5 696 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 NKX1-2Q9UD57 310 aaPredicted RBP15.46■□□□□ 0.07
USP42-201ENST00000306177 MEIS3P2A8K0S8 358 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 CHRM5P08912 532 aaPredicted RBP15.46■□□□□ 0.07
USP42-201ENST00000306177 CYBAP13498 195 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 CSF2RAP15509 400 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 CBX5P45973 191 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 C10orf62Q5T681 223 aaPredicted RBP15.46■□□□□ 0.07
USP42-201ENST00000306177 C17orf99Q6UX52 265 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 OR2AJ1Q8NGZ0 328 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 RAD9AQ99638 391 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 MAPKAP1Q9BPZ7 522 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 MGME1Q9BQP7 344 aa15.46■□□□□ 0.07
USP42-201ENST00000306177 ZNF840PA6NDX5 716 aa15.46■□□□□ 0.06
USP42-201ENST00000306177 CXCR1P25024 350 aa15.46■□□□□ 0.06
USP42-201ENST00000306177 ZNF763Q0D2J5 394 aa15.46■□□□□ 0.06
USP42-201ENST00000306177 TLR1Q15399 786 aa15.46■□□□□ 0.06
USP42-201ENST00000306177 ITPRIPL2Q3MIP1 535 aa15.46■□□□□ 0.06
USP42-201ENST00000306177 TECRLQ5HYJ1 363 aa15.46■□□□□ 0.06
USP42-201ENST00000306177 UBR2Q8IWV8 1755 aa15.46■□□□□ 0.06
USP42-201ENST00000306177 TSPEARQ8WU66 669 aa15.46■□□□□ 0.06
USP42-201ENST00000306177 FATE1Q969F0 183 aa15.46■□□□□ 0.06
USP42-201ENST00000306177 SHDQ96IW2 340 aa15.46■□□□□ 0.06
USP42-201ENST00000306177 FABP12A6NFH5 140 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 RHOP08100 348 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 RAB8AP61006 207 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 MADCAM1Q13477 382 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 FBRSL1Q9HCM7 1045 aaKnown RBP15.45■□□□□ 0.06
USP42-201ENST00000306177 MKS1Q9NXB0 559 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 GIMAP2Q9UG22 337 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 PLAGL1Q9UM63 463 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 PCDHGB1Q9Y5G3 927 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 AREL1O15033 823 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 FAM189A1O60320 539 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 SMSP52788 366 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 GBX2P52951 348 aaPredicted RBP15.45■□□□□ 0.06
USP42-201ENST00000306177 MVKQ03426 396 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 GRM2Q14416 872 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 CNPY1Q3B7I2 92 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 CYS1Q717R9 158 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 SLC9B2Q86UD5 537 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 TMCO6Q96DC7 493 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 IL4I1Q96RQ9 567 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 TRIB3Q96RU7 358 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 Q9N2J8 555 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 LOC100130705A0A1B0GUX0 176 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 SLC16A5O15375 505 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 CPNE3O75131 537 aaKnown RBP15.45■□□□□ 0.06
USP42-201ENST00000306177 STATHP02808 62 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 SUSD1Q6UWL2 747 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 ERN2Q76MJ5 926 aaKnown RBP15.45■□□□□ 0.06
USP42-201ENST00000306177 TRAM1L1Q8N609 369 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 PXYLP1Q8TE99 480 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 UCK2Q9BZX2 261 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 DZANK1Q9NVP4 752 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 ACSL5Q9ULC5 683 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 RCBTB2O95199 551 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 C6orf47O95873 294 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 ST3GAL3Q11203 375 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 IRF5Q13568 498 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 C6orf136Q5SQH8 315 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 IDNKQ5T6J7 187 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 PRPF38BQ5VTL8 546 aaKnown RBP15.45■□□□□ 0.06
USP42-201ENST00000306177 TMEM135Q86UB9 458 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 MED28Q9H204 178 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 MARCH7Q9H992 704 aa15.45■□□□□ 0.06
USP42-201ENST00000306177 PAK6Q9NQU5 681 aaPredicted RBP15.45■□□□□ 0.06
USP42-201ENST00000306177 RGS17Q9UGC6 210 aaPredicted RBP15.45■□□□□ 0.06
USP42-201ENST00000306177 CFIP05156 583 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 ACRV1P26436 265 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 LIPJQ5W064 366 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 SLC29A4Q7RTT9 530 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 SLC25A36Q96CQ1 311 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 HAVCR1Q96D42 359 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 TBX5Q99593 518 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 SERINC1Q9NRX5 453 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms