RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ATP5A1P25705 553 aaKnown RBP13.53□□□□□ -0.24
PRKCB-201ENST00000303531 NDUFS1P28331 727 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 C1orf216Q8TAB5 229 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 SEZ6LQ9BYH1 1024 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 TBL1XR1Q9BZK7 514 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 PCDHGB1Q9Y5G3 927 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 CLCA3PQ9Y6N3 262 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 LMO7Q8WWI1 1683 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 MYO10Q9HD67 2058 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 A0A0D9SEW6 157 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 C6orf47O95873 294 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 NPPAP01160 153 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 ENPP2Q13822 863 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 AMZ1Q400G9 498 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 C22orf39Q6P5X5 142 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 TAS1R3Q7RTX0 852 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 ZNF615Q8N8J6 731 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 TFGQ92734 400 aaPredicted RBP13.53□□□□□ -0.24
PRKCB-201ENST00000303531 BRD7Q9NPI1 651 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 ECHS1P30084 290 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 CHERPQ8IWX8 916 aaKnown RBP13.53□□□□□ -0.24
PRKCB-201ENST00000303531 SLC5A11Q8WWX8 675 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 FCRL3Q96P31 734 aaPredicted RBP13.53□□□□□ -0.24
PRKCB-201ENST00000303531 CCDC106Q9BWC9 280 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 PIRO00625 290 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 TLX2O43763 284 aaPredicted RBP13.53□□□□□ -0.24
PRKCB-201ENST00000303531 CLIC3O95833 236 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 ATF6P18850 670 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 CXCR1P25024 350 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 SP140Q13342 867 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 ZNF234Q14588 700 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 TCEAL6Q6IPX3 200 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 C14orf80Q86SX3 495 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 TM9SF3Q9HD45 589 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 NEUROD4Q9HD90 331 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 HCN3Q9P1Z3 774 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 PCDHGA3Q9Y5H0 932 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 GMEB1Q9Y692 573 aa13.53□□□□□ -0.24
PRKCB-201ENST00000303531 A0A1W2PRQ8 180 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 A8MUA0 341 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 ZNF487B1APH4 448 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 NFKBIEO00221 500 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 ATP4BP51164 291 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 TUBA4AP68366 448 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 SPATS1Q496A3 300 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 TMIGD1Q6UXZ0 262 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 TREML1Q86YW5 311 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 ZNF527Q8NB42 609 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 DGAT2Q96PD7 388 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 HTRA2O43464 458 aaPredicted RBP13.52□□□□□ -0.24
PRKCB-201ENST00000303531 HAPLN1P10915 354 aaPredicted RBP13.52□□□□□ -0.24
PRKCB-201ENST00000303531 RASGEF1BQ0VAM2 473 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 GPR17Q13304 367 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 LINC00471Q8N535 108 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 KCNJ9Q92806 393 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 UCKL1Q9NWZ5 548 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 ZNF639Q9UID6 485 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 PLAGL1Q9UM63 463 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 ERVK-11Q9UQG0 969 aa13.52□□□□□ -0.24
PRKCB-201ENST00000303531 PRSS51A0A1B0GVH4 220 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 MTMR11A4FU01 709 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 OAS1P00973 400 aaKnown RBP13.52□□□□□ -0.25
PRKCB-201ENST00000303531 SLC11A1P49279 550 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 OR12D2P58182 307 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF630Q2M218 657 aaPredicted RBP13.52□□□□□ -0.25
PRKCB-201ENST00000303531 C4orf46Q504U0 113 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 GPRC6AQ5T6X5 926 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 KIAA1614Q5VZ46 1190 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF773Q6PK81 442 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 TOMM5Q8N4H5 51 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 CAMKVQ8NCB2 501 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 GAS2L1Q99501 681 aaPredicted RBP13.52□□□□□ -0.25
PRKCB-201ENST00000303531 C12orf4Q9NQ89 552 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 B4DGG1 531 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 RPP14O95059 124 aaKnown RBP13.52□□□□□ -0.25
PRKCB-201ENST00000303531 SLC15A1P46059 708 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 AP2S1P53680 142 aaPredicted RBP13.52□□□□□ -0.25
PRKCB-201ENST00000303531 DIO3P55073 304 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 SLC3A1Q07837 685 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 CYBRD1Q53TN4 286 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 TICAM1Q8IUC6 712 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 SDR16C5Q8N3Y7 309 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 DCAF4L2Q8NA75 395 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 ZUFSPQ96AP4 578 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 LYARQ9NX58 379 aaKnown RBP13.52□□□□□ -0.25
PRKCB-201ENST00000303531 EDDM13A0A1B0GTR0 161 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 FAM189A1O60320 539 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 ENTPD6O75354 484 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 RCBTB2O95199 551 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 ZNF20P17024 532 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 SLC22A16Q86VW1 577 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 ENDOVQ8N8Q3 282 aaKnown RBP13.52□□□□□ -0.25
PRKCB-201ENST00000303531 POPDC3Q9HBV1 291 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 FAM72CH0Y354 149 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 LDB2O43679 373 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 ABCB7O75027 752 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 CYB5AP00167 134 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 TUBA1BP68363 451 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 MPP2Q14168 576 aa13.52□□□□□ -0.25
PRKCB-201ENST00000303531 FAM72AQ5TYM5 149 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms