RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 OTOFQ9HC10 1997 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZNF197O14709 1029 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 PCDH7O60245 1069 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 CCDC159P0C7I6 412 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 CTSOP43234 321 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 GRIK2Q13002 908 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 MAD2L1BPQ15013 274 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 EIF3MQ7L2H7 374 aaKnown RBP12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 NFKBIDQ8NI38 313 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZNF675Q8TD23 568 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 TMEM159Q96B96 161 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 GORASP2Q9H8Y8 452 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 MIEF1Q9NQG6 463 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 MBD1Q9UIS9 605 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 ILVBLA1L0T0 632 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 NPIPB15A6NHN6 443 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 DRGXA6NNA5 263 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 ARNTLO00327 626 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 AREL1O15033 823 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 JRKO75564 520 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 PRR35P0CG20 571 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 CKBP12277 381 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 CYP2A7P20853 494 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 HMGCLP35914 325 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 ELP6Q0PNE2 266 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 CERS6Q6ZMG9 384 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 GPR149Q86SP6 731 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 CELF5Q8N6W0 485 aaKnown RBP12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 PAPD5Q8NDF8 572 aaKnown RBP12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 SOCS4Q8WXH5 440 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 RAB8BQ92930 207 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 FKBP10Q96AY3 582 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 PKMYT1Q99640 499 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 TP63Q9H3D4 680 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 TRPC4Q9UBN4 977 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 MOSPD1Q9UJG1 213 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 CLEC4EQ9ULY5 219 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 ERVK-11Q9UQG0 969 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 KIAA0100Q14667 2235 aaKnown RBP12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 CCR7P32248 378 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 PCBP2Q15366 365 aaKnown RBP eCLIP12.87□□□□□ -0.353e-10■■□□□ 13
TNFRSF21-201ENST00000296861 LAIR2Q6ISS4 152 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 OR9Q1Q8NGQ5 310 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 SORCS1Q8WY21 1168 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 ART5Q96L15 291 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 GFM1Q96RP9 751 aaKnown RBP12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 KCNH6Q9H252 994 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 TRIT1Q9H3H1 467 aaKnown RBP12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 ABCB8Q9NUT2 735 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 SBF1O95248 1867 aa12.87□□□□□ -0.35
TNFRSF21-201ENST00000296861 PRR23AA6NEV1 266 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 AP2A2O94973 939 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 OAZ2O95190 189 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 EBLN1P0CF75 366 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 CD83Q01151 205 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 SELENBP1Q13228 472 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 PLEKHG6Q3KR16 790 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 NEK5Q6P3R8 708 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 Q6ZVL8 140 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 Q6ZVU0 165 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 OLIG3Q7RTU3 272 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 DDX53Q86TM3 631 aaKnown RBP12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 PIH1D2Q8WWB5 315 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 MYDGFQ969H8 173 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 NACC2Q96BF6 587 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 MTERF3Q96E29 417 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 TRNT1Q96Q11 434 aaKnown RBP12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 P2RY13Q9BPV8 354 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 CLMPQ9H6B4 373 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 KCTD5Q9NXV2 234 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 CFAP97Q9P2B7 532 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 CFAP20Q9Y6A4 193 aaKnown RBP12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZNF840PA6NDX5 716 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 GFRA2O00451 464 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 TMCC2O75069 709 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 RFPL2O75678 378 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 IGSF6O95976 241 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 PTHP01270 115 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 RPLP0P05388 317 aaKnown RBP12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 ALPPL2P10696 532 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 GABRR2P28476 465 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 CTGFP29279 349 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 SOX3P41225 446 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 OR2B6P58173 313 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 ALDH6A1Q02252 535 aaKnown RBP12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 ACVR1Q04771 509 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 EXOC3L2Q2M3D2 409 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 C17orf99Q6UX52 265 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 TRAPPC5Q8IUR0 188 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZNF683Q8IZ20 524 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 NEK6Q9HC98 313 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZDHHC4Q9NPG8 344 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 VPS29Q9UBQ0 182 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 SLC6A14Q9UN76 642 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 WDR90Q96KV7 1748 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 ANKRD28O15084 1053 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 KIAA0513O60268 411 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 WISP3O95389 354 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 C6orf47O95873 294 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms