RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 MARVELD2Q8N4S9 558 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 IL23AQ9NPF7 189 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 ACSL5Q9ULC5 683 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 PRKAB1Q9Y478 270 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 GBAP04062 536 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 H1F0P07305 194 aaKnown RBP16.2■□□□□ 0.18
PHRF1-201ENST00000264555 CTSAP10619 480 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 PFKLP17858 780 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 MAGEA3P43357 314 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 ZNF554Q86TJ5 538 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 MOSPD2Q8NHP6 518 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 FAR1Q8WVX9 515 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 MRPS17Q9Y2R5 130 aaKnown RBP16.2■□□□□ 0.18
PHRF1-201ENST00000264555 C1GALT1C1LP0DN25 315 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 ALAS2P22557 587 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 XKP51811 444 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 CYBRD1Q53TN4 286 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 SLC38A3Q99624 504 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 N6AMT1Q9Y5N5 214 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 H0YAE9 185 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 HSD17B1P14061 328 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 SLC6A4P31645 630 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 PCBP2Q15366 365 aaKnown RBP eCLIP16.2■□□□□ 0.18
PHRF1-201ENST00000264555 TIGD6Q17RP2 521 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 OGFOD2Q6N063 350 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 ANKRD26P1Q6NSI1 321 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 CRTC1Q6UUV9 634 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 USP43Q70EL4 1123 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 KBTBD6Q86V97 674 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 OR10Q1Q8NGQ4 319 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 GPR151Q8TDV0 419 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 TRIM63Q969Q1 353 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 ZSCAN32Q9NX65 697 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 WBP11Q9Y2W2 641 aaKnown RBP16.2■□□□□ 0.18
PHRF1-201ENST00000264555 RREB1Q92766 1687 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 TTC34A8MYJ7 566 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 EFCAB9A8MZ26 197 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 ADAMTS4O75173 837 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 RASAL1O95294 804 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 JUNP05412 331 aaKnown RBP16.2■□□□□ 0.18
PHRF1-201ENST00000264555 SDC2P34741 201 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 CMPK2Q5EBM0 449 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 LINC00471Q8N535 108 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 UXS1Q8NBZ7 420 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 CAMKVQ8NCB2 501 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 FBXO27Q8NI29 283 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 KHSRPQ92945 711 aaKnown RBP eCLIP16.2■□□□□ 0.181e-7■□□□□ 11.1
PHRF1-201ENST00000264555 KCNK6Q9Y257 313 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 LAMB2P55268 1798 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 CD36P16671 472 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 ZNF12P17014 697 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 SLC13A2Q13183 592 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 CRB2Q5IJ48 1285 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 NRSN1Q8IZ57 195 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 CBARPQ8N350 705 aaPredicted RBP16.19■□□□□ 0.18
PHRF1-201ENST00000264555 PKP4Q99569 1192 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 MAPKAP1Q9BPZ7 522 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 KLF16Q9BXK1 252 aaPredicted RBP16.19■□□□□ 0.18
PHRF1-201ENST00000264555 AMBNQ9NP70 447 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 ADAP2Q9NPF8 381 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 CMTM6Q9NX76 183 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 OR5F1O95221 314 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 ZNF8P17098 575 aaPredicted RBP16.19■□□□□ 0.18
PHRF1-201ENST00000264555 PRKACGP22612 351 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 RAPSNQ13702 412 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 JAZF1Q86VZ6 243 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 FAM110BQ8TC76 370 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 CD200R1Q8TD46 325 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 SLC39A13Q96H72 371 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 YIPF4Q9BSR8 244 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 BOCQ9BWV1 1114 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 TRIM8Q9BZR9 551 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 PLAGL1Q9UM63 463 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 MCIDASD6RGH6 385 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 ERVPABLB-1P60509 514 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 KCTD11Q693B1 232 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 SLC8B1Q6J4K2 584 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 TSPAN33Q86UF1 283 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 CNOT11Q9UKZ1 510 aaKnown RBP16.19■□□□□ 0.18
PHRF1-201ENST00000264555 RHPN2P1A8MT19 583 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 VEGFDO43915 354 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 SRCP12931 536 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 GSTM3P21266 225 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 RCVRNP35243 200 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 ADRA1AP35348 466 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 CDKN1CP49918 316 aaPredicted RBP16.19■□□□□ 0.18
PHRF1-201ENST00000264555 EIF4HQ15056 248 aaKnown RBP16.19■□□□□ 0.18
PHRF1-201ENST00000264555 CRELD1Q96HD1 420 aa16.19■□□□□ 0.18
PHRF1-201ENST00000264555 DIRAS1O95057 198 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 NUP62P37198 522 aaPredicted RBP16.18■□□□□ 0.18
PHRF1-201ENST00000264555 AVPR1BP47901 424 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 CCT3P49368 545 aaKnown RBP16.18■□□□□ 0.18
PHRF1-201ENST00000264555 SRP54P61011 504 aaKnown RBP16.18■□□□□ 0.18
PHRF1-201ENST00000264555 ELAVL3Q14576 367 aaKnown RBP16.18■□□□□ 0.18
PHRF1-201ENST00000264555 ZNF648Q5T619 568 aaPredicted RBP16.18■□□□□ 0.18
PHRF1-201ENST00000264555 ZNF773Q6PK81 442 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 ANKFN1Q8N957 763 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 OR13J1Q8NGT2 312 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 ARRDC2Q8TBH0 407 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 GAS2L1Q99501 681 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms