RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 COILP38432 576 aaPredicted RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 SKIV2L2P42285 1042 aaKnown RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 XCR1P46094 333 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 AGTR2P50052 363 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 TAS2R50P59544 299 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 TBPL1P62380 186 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 MPP1Q00013 466 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 OC90Q02509 493 aaPredicted RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 RELAQ04206 551 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 ZRSR2Q15696 482 aaKnown RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 MTFR2Q6P444 385 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 ZNF662Q6ZS27 426 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 CPEB2Q7Z5Q1 589 aaKnown RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 ASPGQ86U10 573 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 ZC3H7AQ8IWR0 971 aaKnown RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 LRRC8AQ8IWT6 810 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 PPIL6Q8IXY8 311 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 SRRM1Q8IYB3 904 aaKnown RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 AMER3Q8N944 861 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 OR51Q1Q8NH59 317 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 SLC13A3Q8WWT9 602 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 NR4A3Q92570 626 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 ZNF354BQ96LW1 612 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 NDNQ99608 321 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 BARD1Q99728 777 aaKnown RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 AARSD1Q9BTE6 412 aaKnown RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 ATG10Q9H0Y0 220 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 PPP2R2CQ9Y2T4 447 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 JRKLQ9Y4A0 524 aa11.6□□□□□ -0.55
TRAF4-202ENST00000262396 UTP20O75691 2785 aaKnown RBP11.6□□□□□ -0.55
TRAF4-202ENST00000262396 FER1L5A0AVI2 2057 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 SNRNP200O75643 2136 aaKnown RBP11.59□□□□□ -0.55
TRAF4-202ENST00000262396 IGHV3-20A0A0C4DH32 117 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 FEZF1A0PJY2 475 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 SGK494L7N484 410 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 EIF3FO00303 357 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-202ENST00000262396 CCL21O00585 134 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 E2F3O00716 465 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 P2RX6O15547 441 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 TTI1O43156 1089 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 NSA2O95478 260 aaKnown RBP11.59□□□□□ -0.55
TRAF4-202ENST00000262396 CELA2AP08217 269 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 PGAM1P18669 254 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 SOX11P35716 441 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 MAGEA6P43360 314 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 NAE1Q13564 534 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 PCOLCEQ15113 449 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 SP5Q6BEB4 398 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-202ENST00000262396 CAPN13Q6MZZ7 669 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-202ENST00000262396 TTC27Q6P3X3 843 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 AGTRAPQ6RW13 159 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 HORMAD2Q8N7B1 307 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 FAM98AQ8NCA5 519 aaKnown RBP11.59□□□□□ -0.55
TRAF4-202ENST00000262396 DNAJB8Q8NHS0 232 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 GIMAP7Q8NHV1 300 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 CD200R1Q8TD46 325 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 EEF1AKMT1Q8WVE0 214 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 MARVELD3Q96A59 401 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 LINGO1Q96FE5 620 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 MS4A14Q96JA4 679 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 CYTH2Q99418 400 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 MACROD1Q9BQ69 325 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 UTP23Q9BRU9 249 aaKnown RBP11.59□□□□□ -0.55
TRAF4-202ENST00000262396 HAUS8Q9BT25 410 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 RBCK1Q9BYM8 510 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 FAM129AQ9BZQ8 928 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 VN1R1Q9GZP7 353 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 PARVBQ9HBI1 364 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 ARL15Q9NXU5 204 aa11.59□□□□□ -0.55
TRAF4-202ENST00000262396 ANKRD12Q6UB98 2062 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 ZCWPW2A0A1B0GU75 182 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 GFYI3L273 518 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 OR1F1O43749 312 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 CDC123O75794 336 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-202ENST00000262396 TTC4O95801 387 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 STSP08842 583 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 CDH1P12830 882 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 CD46P15529 392 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 BCL6P41182 706 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 CCR8P51685 355 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 IL2P60568 153 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 RGS1Q08116 209 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 SP140Q13342 867 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 NSDHLQ15738 373 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 EXT1Q16394 746 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 MEP1AQ16819 746 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.58□□□□□ -0.56
TRAF4-202ENST00000262396 ZNF766Q5HY98 468 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 FCRLBQ6BAA4 426 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 ZNF549Q6P9A3 640 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 TMEM205Q6UW68 189 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 PCGF5Q86SE9 256 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 CYP4X1Q8N118 509 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 SLC5A8Q8N695 610 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 GPATCH11Q8N954 259 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 ATL1Q8WXF7 558 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 PEX11GQ96HA9 241 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 MAGED4Q96JG8 741 aa11.58□□□□□ -0.56
TRAF4-202ENST00000262396 LPAR4Q99677 370 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms