RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 SLC39A1Q9NY26 324 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 LAMP5Q9UJQ1 280 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 NR2E1Q9Y466 385 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ZNF726A6NNF4 738 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 FOXO6A8MYZ6 492 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 NPIPA5E9PKD4 350 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 EEDO75530 441 aaKnown RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 OR4F21O95013 312 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 HLA-DPB1P04440 258 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 DBIP07108 87 aaKnown RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 CD48P09326 243 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SNHG28P0DPA3 235 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 OR1D2P34982 312 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 GSCP56915 257 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ERVK-21P61565 698 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 TARBP2Q15633 366 aaKnown RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 BTBD16Q32M84 506 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 GPR33Q49SQ1 333 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 BORAQ6PGQ7 559 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 MFSD2AQ8NA29 543 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ZMIZ2Q8NF64 920 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 BPIFB1Q8TDL5 484 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SLC22A18Q96BI1 424 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 OTUB2Q96DC9 234 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 CDCA5Q96FF9 252 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 DGAT2Q96PD7 388 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 FUZQ9BT04 418 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 IL36AQ9UHA7 158 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SLC7A8Q9UHI5 535 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 NPIPA1Q9UND3 350 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 DOCK4Q8N1I0 1966 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ZSCAN5BA6NJL1 495 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 CLCNKBP51801 687 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SLC18A2Q05940 514 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ZNF423Q2M1K9 1284 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 CYBRD1Q53TN4 286 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 PDE12Q6L8Q7 609 aaKnown RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 REEP3Q6NUK4 255 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 NCEH1Q6PIU2 408 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SLC24A5Q71RS6 500 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 LDB1Q86U70 411 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 NAT8LQ8N9F0 302 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 MAELQ96JY0 434 aaKnown RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ORAI3Q9BRQ5 295 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 MAGIXQ9H6Y5 334 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 PCDHB16Q9NRJ7 776 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ERVK-11Q9UQG0 969 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 NOP16Q9Y3C1 178 aaKnown RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 NDUFS4O43181 175 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 RNASEH2AO75792 299 aaKnown RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 CXCL9Q07325 125 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ZNF676Q8N7Q3 588 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 NTAN1Q96AB6 310 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 PCED1BQ96HM7 432 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 UCK2Q9BZX2 261 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 MEAF6Q9HAF1 191 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SNX10Q9Y5X0 201 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ZNF646O15015 1829 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ZNF318Q5VUA4 2279 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 DDX60LQ5H9U9 1706 aaKnown RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 M0R129 80 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ARL6IP5O75915 188 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SCGB1D2O95969 90 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 HTR1AP08908 422 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 LAG3P18627 525 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 YAP1P46937 504 aaKnown RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 BLKP51451 505 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 MC1RQ01726 317 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ZNF33AQ06730 810 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 KLF1Q13351 362 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 PITRM1Q5JRX3 1037 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SIRPB2Q5JXA9 342 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 C6orf183Q5T699 404 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SDHAF4Q5VUM1 108 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 KIAA1161Q6NSJ0 714 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 TATDN1Q6P1N9 297 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 CILP2Q8IUL8 1156 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ZNF709Q8N972 641 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SPATA22Q8NHS9 363 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 PLEKHO2Q8TD55 490 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 GRHL3Q8TE85 626 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 MIR1-1HGQ9H1L0 117 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SBF1O95248 1867 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SLC33A1O00400 549 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ACTA2P62736 377 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 ACTG2P63267 376 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 SLC10A7Q0GE19 358 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 CMPK2Q5EBM0 449 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 MEDAGQ5VYS4 303 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 FRG2Q64ET8 278 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 CENPSQ8N2Z9 138 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 NAT16Q8N8M0 369 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 LSM14AQ8ND56 463 aaKnown RBP4.67□□□□□ -1.66
RC3H1-201ENST00000258349 PCDH19Q8TAB3 1148 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 FRG2BQ96QU4 278 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 GPR20Q99678 358 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 GLS2Q9UI32 602 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 TMEM59LQ9UK28 342 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 IQCF5A8MTL0 148 aa4.67□□□□□ -1.66
RC3H1-201ENST00000258349 B8ZZF3 427 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms