RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TEX264Q9Y6I9 313 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 FAM169AQ9Y6X4 670 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 CCDC162PA2VCL2 907 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 OR5H15A6NDH6 313 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 MROH6A6NGR9 719 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 H7C0S8 307 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 BANF1O75531 89 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 BMP10O95393 424 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 CLDN14O95500 239 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 S1PR4O95977 384 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 ELK3P41970 407 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 YBX1P67809 324 aaKnown RBP13.1□□□□□ -0.31
DDX39A-201ENST00000242776 GRB7Q14451 532 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 SYT16Q17RD7 645 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 MSS51Q4VC12 460 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 SPANXN3Q5MJ09 141 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 ABHD17BQ5VST6 288 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 EMBQ6PCB8 327 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 RELL1Q8IUW5 271 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 PALM2Q8IXS6 379 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 GSPT2Q8IYD1 628 aaKnown RBP13.1□□□□□ -0.31
DDX39A-201ENST00000242776 OR2L8Q8NGY9 312 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 ADAMTS18Q8TE60 1221 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 ZNF669Q96BR6 464 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-201ENST00000242776 POM121Q96HA1 1249 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 HES7Q9BYE0 225 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 ANKRD10Q9NXR5 420 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 RUVBL2Q9Y230 463 aaKnown RBP13.1□□□□□ -0.31
DDX39A-201ENST00000242776 IGHV3-20A0A0C4DH32 117 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 FITM1A5D6W6 292 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 QSOX1O00391 747 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 RASGRF2O14827 1237 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 GSTA2P09210 222 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 MYBL2P10244 700 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 MAGEA4P43358 317 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 ITIH4Q14624 930 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 CCSMST1Q4G0I0 132 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 ZNF766Q5HY98 468 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 MEX3BQ6ZN04 569 aaKnown RBP13.09□□□□□ -0.31
DDX39A-201ENST00000242776 ANKMY2Q8IV38 441 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 DCUN1D3Q8IWE4 304 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 SLC22A15Q8IZD6 547 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 DNAJB8Q8NHS0 232 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 GABPB2Q8TAK5 448 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-201ENST00000242776 SKA2Q8WVK7 121 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-201ENST00000242776 CFAP36Q96G28 342 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 C10orf90Q96M02 699 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 ZNF285Q96NJ3 590 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 ACAT2Q9BWD1 397 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 CHRAC1Q9NRG0 131 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 RIC8BQ9NVN3 520 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 STMN3Q9NZ72 180 aa13.09□□□□□ -0.31
DDX39A-201ENST00000242776 NAV3Q8IVL0 2385 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 NPIPA5E9PKD4 350 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 FOXN2P32314 431 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 PHBP35232 272 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 PRAMEP78395 509 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 MAT1AQ00266 395 aaKnown RBP13.08□□□□□ -0.32
DDX39A-201ENST00000242776 HSF1Q00613 529 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 TSTA3Q13630 321 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-201ENST00000242776 FASTKD3Q14CZ7 662 aaKnown RBP13.08□□□□□ -0.32
DDX39A-201ENST00000242776 MUM1Q2TAK8 710 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.327e-7■□□□□ 8.4
DDX39A-201ENST00000242776 HP1BP3Q5SSJ5 553 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-201ENST00000242776 KIAA0930Q6ICG6 404 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-201ENST00000242776 PRMT9Q6P2P2 845 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 PACS1Q6VY07 963 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 SPNS3Q6ZMD2 512 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 LDB1Q86U70 411 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-201ENST00000242776 AGGF1Q8N302 714 aaeCLIP13.08□□□□□ -0.32
DDX39A-201ENST00000242776 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.08□□□□□ -0.32
DDX39A-201ENST00000242776 GSDMBQ8TAX9 411 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 MMABQ96EY8 250 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-201ENST00000242776 CDC42EP4Q9H3Q1 356 aaKnown RBP13.08□□□□□ -0.32
DDX39A-201ENST00000242776 ARGLU1Q9NWB6 273 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-201ENST00000242776 SLC2A6Q9UGQ3 507 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 NPIPA1Q9UND3 350 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 NFS1Q9Y697 457 aa13.08□□□□□ -0.32
DDX39A-201ENST00000242776 SCN3AQ9NY46 2000 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 CCDC151A5D8V7 595 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 SRPX2O60687 465 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-201ENST00000242776 SEC24DO94855 1032 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-201ENST00000242776 GOT2P00505 430 aaKnown RBP13.07□□□□□ -0.32
DDX39A-201ENST00000242776 STATHP02808 62 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 RPN2P04844 631 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 FDXRP22570 491 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 NMBRP28336 390 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 CSNK1G2P78368 415 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 PLOD1Q02809 727 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-201ENST00000242776 ACVR1Q04771 509 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 CRYMQ14894 314 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 PCOLCEQ15113 449 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 HKDC1Q2TB90 917 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 ANKRD20A4Q4UJ75 823 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 MFSD4BQ5TF39 518 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 STEAP4Q687X5 459 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 AFTPHQ6ULP2 937 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 TRMT10CQ7L0Y3 403 aaKnown RBP13.07□□□□□ -0.32
DDX39A-201ENST00000242776 AENQ8WTP8 325 aaKnown RBP13.07□□□□□ -0.32
DDX39A-201ENST00000242776 HDAC10Q969S8 669 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms