RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 USP39Q53GS9 565 aaKnown RBP19.89■□□□□ 0.77
SNX3-201ENST00000230085 FBXO48Q5FWF7 155 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 TOR1AIP1Q5JTV8 583 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 CDKL4Q5MAI5 379 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 SPANXN4Q5MJ08 99 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 ANKRD34AQ69YU3 496 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 OR2T5Q6IEZ7 315 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 PSAPL1Q6NUJ1 521 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 CERS6Q6ZMG9 384 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 MILR1Q7Z6M3 343 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 SERPINA11Q86U17 422 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 UBALD2Q8IYN6 164 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 OR2T29Q8NH02 315 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 TESCQ96BS2 214 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 EHD1Q9H4M9 534 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 IPPKQ9H8X2 491 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 NPAP1Q9NZP6 1156 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 CCDC59Q9P031 241 aaKnown RBP19.89■□□□□ 0.77
SNX3-201ENST00000230085 COL4A2P08572 1712 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 COL4A3Q01955 1670 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 TOR1BO14657 336 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 SERPINA1P01009 418 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 EBLN1P0CF75 366 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 SLC2A4P14672 509 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 NR4A1P22736 598 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 LIMK1P53667 647 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 CLDN8P56748 225 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 VBP1P61758 197 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 RPL38P63173 70 aaKnown RBP19.88■□□□□ 0.77
SNX3-201ENST00000230085 VAC14Q08AM6 782 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 ABRQ12979 859 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 TBCEQ15813 527 aaPredicted RBP19.88■□□□□ 0.77
SNX3-201ENST00000230085 ZNF404Q494X3 552 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 MPPE1Q53F39 396 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 FAHD1Q6P587 224 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 C12orf40Q86WS4 652 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 ZDHHC21Q8IVQ6 265 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 TMEM132CQ8N3T6 1108 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 NETO1Q8TDF5 533 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 FAM120BQ96EK7 910 aaKnown RBP19.88■□□□□ 0.77
SNX3-201ENST00000230085 RPRD1AQ96P16 312 aaPredicted RBP19.88■□□□□ 0.77
SNX3-201ENST00000230085 CDK15Q96Q40 435 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 ALOXE3Q9BYJ1 711 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 MARK1Q9P0L2 795 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 CA14Q9ULX7 337 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 CLEC4EQ9ULY5 219 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 PIAS3Q9Y6X2 628 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 BDP1A6H8Y1 2624 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 AGAP5A6NIR3 686 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 FAM47E-STBD1D6RA91 191 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 FFAR2O15552 330 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 TBL1XO60907 577 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 GJB3O75712 270 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 MC4RP32245 332 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 PCYT1AP49585 367 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 DAPP51397 102 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 DNASE1L3Q13609 305 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 PTGR1Q14914 329 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 KIAA1614Q5VZ46 1190 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 LAIR1Q6GTX8 287 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 PNCKQ6P2M8 343 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 CIR1Q86X95 450 aaPredicted RBP19.88■□□□□ 0.77
SNX3-201ENST00000230085 MCFD2Q8NI22 146 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 ITCHQ96J02 903 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 ITPAQ9BY32 194 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 HOXD1Q9GZZ0 328 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 VNN3Q9NY84 501 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 WNT16Q9UBV4 365 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 FBXL21Q9UKT6 434 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 GMPPBQ9Y5P6 360 aa19.88■□□□□ 0.77
SNX3-201ENST00000230085 HOXC11O43248 304 aaPredicted RBP19.87■□□□□ 0.77
SNX3-201ENST00000230085 PIRTP0C851 137 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 PRPS2P11908 318 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 PRKACGP22612 351 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 PIK3CGP48736 1102 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 NCS1P62166 190 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 ZXDAP98168 799 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 AKAP14Q86UN6 197 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 ZHX1-C8orf76Q96EF9 292 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 OR52E6Q96RD3 313 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 GABARAPL3Q9BY60 117 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 RDH14Q9HBH5 336 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 LRTM1Q9HBL6 345 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 FKBP14Q9NWM8 211 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 SPATA7Q9P0W8 599 aa19.87■□□□□ 0.77
SNX3-201ENST00000230085 SERTM1A2A2V5 107 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 EFCAB9A8MZ26 197 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 KDELR3O43731 214 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 CD72P21854 359 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 CTHP32929 405 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 MAP2K4P45985 399 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 SLC6A11P48066 632 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 PGS1Q32NB8 556 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 CATSPEREQ5SY80 951 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 ATAD3BQ5T9A4 648 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 ERICH5Q6P6B1 374 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 PLD3Q8IV08 490 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 LIX1Q8N485 282 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 ESAMQ96AP7 390 aa19.86■□□□□ 0.77
SNX3-201ENST00000230085 OPTCQ9UBM4 332 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms