RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 C2orf27AQ580R0 203 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 ZBTB46Q86UZ6 589 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 MSRB3Q8IXL7 192 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 C1orf52Q8N6N3 182 aaKnown RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 CATSPER1Q8NEC5 780 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 TRPV3Q8NET8 790 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 NEIL2Q969S2 332 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 FAM120BQ96EK7 910 aaKnown RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 ASB16Q96NS5 453 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 MYADMQ96S97 322 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 NTMT1Q9BV86 223 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 OR51B5Q9H339 312 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 SMURF2Q9HAU4 748 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 STOX2Q9P2F5 926 aaPredicted RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 PNMA8BQ9ULN7 279 aaPredicted RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 SPEF1Q9Y4P9 236 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 A0A0G2JN53 185 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 MBTPS2O43462 519 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 B4GAT1O43505 415 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 NUAK1O60285 661 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 POP7O75817 140 aaKnown RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 FGF19O95750 216 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 FUCA1P04066 466 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 OCM2P0CE71 109 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 OCMP0CE72 109 aaPredicted RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 DDX6P26196 483 aaKnown RBP eCLIP9.62□□□□□ -0.871e-8■□□□□ 10.7
USP11-201ENST00000218348 ILF2Q12905 390 aaKnown RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 BNIP2Q12982 314 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 NKG7Q16617 165 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 NADK2Q4G0N4 442 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 USP39Q53GS9 565 aaKnown RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 EGFLAMQ63HQ2 1017 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 NOXRED1Q6NXP6 359 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 STON2Q8WXE9 905 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 DACT3Q96B18 629 aaPredicted RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 ITCHQ96J02 903 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 ZSCAN5AQ9BUG6 496 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 SORBS1Q9BX66 1292 aaKnown RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 TMEM121BQ9BXQ6 578 aaPredicted RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 OSBPL6Q9BZF3 934 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 REXO4Q9GZR2 422 aaKnown RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 UBE2ZQ9H832 354 aaPredicted RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 GULP1Q9UBP9 304 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 DPP7Q9UHL4 492 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 BTBD3Q9Y2F9 522 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 NINQ8N4C6 2090 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 IGLV3-16A0A075B6K0 115 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 IGLON5A6NGN9 336 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 RFXANKO14593 260 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 SLC9A3R1O14745 358 aaPredicted RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 LDLRP01130 860 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 CATP04040 527 aaKnown RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 PABPC4LP0CB38 370 aaKnown RBP9.62□□□□□ -0.87
USP11-201ENST00000218348 SMIM18P0DKX4 95 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 COX7A2P14406 83 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 ENTPD1P49961 510 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 ACSM2AQ08AH3 577 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 TMEM31Q5JXX7 168 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 C9orf64Q5T6V5 341 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 ACSM2BQ68CK6 577 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 LCN8Q6JVE9 175 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 PLD3Q8IV08 490 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 TRAM1L1Q8N609 369 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 METTL25Q8N6Q8 603 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 OR4K1Q8NGD4 311 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 SH3KBP1Q96B97 665 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 PANX1Q96RD7 426 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 LGR4Q9BXB1 951 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 PLA2G2FQ9BZM2 168 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 NEK6Q9HC98 313 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 TRPS1Q9UHF7 1281 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 ASF1AQ9Y294 204 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 PPIL1Q9Y3C6 166 aa9.62□□□□□ -0.87
USP11-201ENST00000218348 SPINT1O43278 529 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CBFA2T3O75081 653 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 PAK4O96013 591 aaPredicted RBP9.61□□□□□ -0.87
USP11-201ENST00000218348 PAHP00439 452 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 SERPIND1P05546 499 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 ZNF30P17039 623 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 FSHRP23945 695 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 EVI2BP34910 448 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 TIE1P35590 1138 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CLK1P49759 484 aaKnown RBP9.61□□□□□ -0.87
USP11-201ENST00000218348 DSTNP60981 165 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 RPS13P62277 151 aaKnown RBP9.61□□□□□ -0.87
USP11-201ENST00000218348 MC1RQ01726 317 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CNTN1Q12860 1018 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 KIAA0040Q15053 153 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CYP27C1Q4G0S4 372 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 DGLUCYQ7Z3D6 616 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 TECPR1Q7Z6L1 1165 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 FAM124AQ86V42 546 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 GPR180Q86V85 440 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 LSRQ86X29 649 aaPredicted RBP9.61□□□□□ -0.87
USP11-201ENST00000218348 LSMEM1Q8N8F7 131 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 OR8D1Q8WZ84 308 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 NUS1Q96E22 293 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 FOPNLQ96NB1 174 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CCM2Q9BSQ5 444 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms