RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 CNOT3O75175 753 aaKnown RBP12.85□□□□□ -0.35
SRP54-201ENST00000216774 ALDH1A1P00352 501 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 SOD2P04179 222 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 LCKP06239 509 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 C1SP09871 688 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 CD22P20273 847 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 CRYBA2P53672 197 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 TEAD4Q15561 434 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 TBCEQ15813 527 aaPredicted RBP12.85□□□□□ -0.35
SRP54-201ENST00000216774 XKR6Q5GH73 641 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 CPTPQ5TA50 214 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 ANXA8L1Q5VT79 327 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 TUBA3EQ6PEY2 450 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 RFLNAQ6ZTI6 216 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 PAGE2Q7Z2X7 111 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 LACC1Q8IV20 430 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 P3H2Q8IVL5 708 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 CADM3Q8N126 398 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 RNF175Q8N4F7 328 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 MYDGFQ969H8 173 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 SH3KBP1Q96B97 665 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 DACH2Q96NX9 599 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 ZIC5Q96T25 663 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 COPS4Q9BT78 406 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 DOHHQ9BU89 302 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 MMP27Q9H306 513 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 IL21Q9HBE4 155 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 PSORS1C1Q9UIG5 152 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 MBD1Q9UIS9 605 aaPredicted RBP12.85□□□□□ -0.35
SRP54-201ENST00000216774 CLEC4EQ9ULY5 219 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 RNF6Q9Y252 685 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 HS3ST2Q9Y278 367 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 TRIM17Q9Y577 477 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 A3GALT2U3KPV4 340 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 BRCA2P51587 3418 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 ISPDA4D126 451 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 ADAMDEC1O15204 470 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 YY2O15391 372 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 AQP9O43315 295 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 AP2A2O94973 939 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 GGT2P36268 569 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 HNF4AP41235 474 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 EIF2B2P49770 351 aaKnown RBP12.85□□□□□ -0.35
SRP54-201ENST00000216774 TEKQ02763 1124 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 PCDH1Q08174 1060 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 RAB33AQ14088 237 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 RGNQ15493 299 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 GRHL2Q6ISB3 625 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 C22orf39Q6P5X5 142 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 TCEAL8Q8IYN2 117 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 MCFD2Q8NI22 146 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 ASZ1Q8WWH4 475 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 ATL1Q8WXF7 558 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 DNASE1L2Q92874 299 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 RPL3LQ92901 407 aaKnown RBP12.85□□□□□ -0.35
SRP54-201ENST00000216774 CLP1Q92989 425 aaKnown RBP12.85□□□□□ -0.35
SRP54-201ENST00000216774 UBE2FQ969M7 185 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 EMILIN2Q9BXX0 1053 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 PCDH12Q9NPG4 1184 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 INSL5Q9Y5Q6 135 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 A0A1W2PQ67 120 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 SLCO2B1O94956 709 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 GSTM1P09488 218 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 PTX3P26022 381 aaPredicted RBP12.84□□□□□ -0.35
SRP54-201ENST00000216774 CLK1P49759 484 aaKnown RBP12.84□□□□□ -0.35
SRP54-201ENST00000216774 DOC2AQ14183 400 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 LHX8Q68G74 356 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 FAM124AQ86V42 546 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 THOC6Q86W42 341 aaKnown RBP12.84□□□□□ -0.35
SRP54-201ENST00000216774 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 NPAS3Q8IXF0 933 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 C11orf65Q8NCR3 313 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 MTERF1Q99551 399 aaKnown RBP12.84□□□□□ -0.35
SRP54-201ENST00000216774 DCSTAMPQ9H295 470 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 RUBCNLQ9H714 662 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 BRD9Q9H8M2 597 aa12.84□□□□□ -0.35
SRP54-201ENST00000216774 SAGE2PA6NJ88 616 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 GABRR3A8MPY1 467 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 TAF4O00268 1085 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 AIREO43918 545 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 RFPL2O75678 378 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 PARNO95453 639 aaKnown RBP12.83□□□□□ -0.35
SRP54-201ENST00000216774 POP4O95707 220 aaKnown RBP12.83□□□□□ -0.35
SRP54-201ENST00000216774 RRM2P31350 389 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 EIF2DP41214 584 aaKnown RBP12.83□□□□□ -0.35
SRP54-201ENST00000216774 CTSOP43234 321 aaPredicted RBP12.83□□□□□ -0.35
SRP54-201ENST00000216774 TMED10P49755 219 aaKnown RBP12.83□□□□□ -0.35
SRP54-201ENST00000216774 STK19P49842 368 aaPredicted RBP12.83□□□□□ -0.35
SRP54-201ENST00000216774 CDC20Q12834 499 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 DNASE1L3Q13609 305 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 ELOAQ14241 798 aaKnown RBP12.83□□□□□ -0.35
SRP54-201ENST00000216774 HKDC1Q2TB90 917 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 ZNF404Q494X3 552 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 SERPINA13PQ6UXR4 307 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 BBS7Q8IWZ6 715 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 KLHDC8AQ8IYD2 350 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 DNAJC22Q8N4W6 341 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 CDC26Q8NHZ8 85 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 ELMO1Q92556 727 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms