RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 ATG10Q9H0Y0 220 aa16.86■□□□□ 0.29
PTPN11-207ENST00000639857 ABCF3Q9NUQ8 709 aa16.86■□□□□ 0.29
PTPN11-207ENST00000639857 C14orf105Q9NVL8 296 aa16.86■□□□□ 0.29
PTPN11-207ENST00000639857 FAM159BA6NKW6 160 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 DPM1O60762 260 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 IPO13O94829 963 aaKnown RBP16.85■□□□□ 0.29
PTPN11-207ENST00000639857 TUBB4AP04350 444 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 ALPPP05187 535 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 NPPBP16860 134 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 NR1D1P20393 614 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 SLC12A2P55011 1212 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 PLTPP55058 493 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 TAS2R39P59534 338 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 CSNK1G2P78368 415 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 AIMP2Q13155 320 aaKnown RBP16.85■□□□□ 0.29
PTPN11-207ENST00000639857 WHAMMP3Q1A5X7 153 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 HKDC1Q2TB90 917 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 TMEM207Q6UWW9 146 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 FBXO25Q8TCJ0 367 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 STT3BQ8TCJ2 826 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 MIEF2Q96C03 454 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 C16orf45Q96MC5 204 aaPredicted RBP16.85■□□□□ 0.29
PTPN11-207ENST00000639857 SYNPO2LQ9H987 977 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 MKKSQ9NPJ1 570 aaPredicted RBP16.85■□□□□ 0.29
PTPN11-207ENST00000639857 SMYD2Q9NRG4 433 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 MAP4K5Q9Y4K4 846 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 HS3ST3B1Q9Y662 390 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 MAU2Q9Y6X3 613 aa16.85■□□□□ 0.29
PTPN11-207ENST00000639857 CYC1P08574 325 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 ANXA5P08758 320 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 ZGLP1P0C6A0 271 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 STX2P32856 288 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 GP5P40197 560 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 SLC26A3P40879 764 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 HNMTP50135 292 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 NAB1Q13506 487 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 MYBPC3Q14896 1274 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 C8orf74Q6P047 294 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 ZDHHC24Q6UX98 284 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 C3orf62Q6ZUJ4 267 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 VN1R4Q7Z5H5 301 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 GALNT16Q8N428 558 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 METTL27Q8N6F8 245 aaPredicted RBP16.84■□□□□ 0.29
PTPN11-207ENST00000639857 CAMKVQ8NCB2 501 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 GPR22Q99680 433 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 RBBP8Q99708 897 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 CRB3Q9BUF7 120 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 NUDT9Q9BW91 350 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 TGIF2Q9GZN2 237 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 DERL2Q9GZP9 239 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 GPAMQ9HCL2 828 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 ATP13A2Q9NQ11 1180 aa16.84■□□□□ 0.29
PTPN11-207ENST00000639857 A0A1W2PQ72 361 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 H0YIG0 161 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 SOCS6O14544 535 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 P2RX6O15547 441 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 WISP3O95389 354 aaPredicted RBP16.83■□□□□ 0.28
PTPN11-207ENST00000639857 SAT1P21673 171 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 AVPR1BP47901 424 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 CCR8P51685 355 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 KCNC4Q03721 635 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 KLC1Q07866 573 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 RBBP7Q16576 425 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 ZXDCQ2QGD7 858 aaPredicted RBP16.83■□□□□ 0.28
PTPN11-207ENST00000639857 TUBB8Q3ZCM7 444 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 CAPN12Q6ZSI9 719 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 DTWD1Q8N5C7 304 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 TBC1D19Q8N5T2 526 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 AMER3Q8N944 861 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 OR4K1Q8NGD4 311 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 TM4SF19Q96DZ7 209 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 TRIM4Q9C037 500 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 CLMPQ9H6B4 373 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 SOX17Q9H6I2 414 aaPredicted RBP16.83■□□□□ 0.28
PTPN11-207ENST00000639857 FBXL4Q9UKA2 621 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 SH2B3Q9UQQ2 575 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 OARD1Q9Y530 152 aa16.83■□□□□ 0.28
PTPN11-207ENST00000639857 FOXS1O43638 330 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 NSA2O95478 260 aaKnown RBP16.82■□□□□ 0.28
PTPN11-207ENST00000639857 GUCA1CO95843 209 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 C1QAP02745 245 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 SLC35G6P0C7Q6 338 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 ATXN8OSP0DMR3 200 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 CDH1P12830 882 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 MAGEA4P43358 317 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 PGGT1BP53609 377 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 FOXL2P58012 376 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 GPX6P59796 221 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 TMEM214Q6NUQ4 689 aaKnown RBP16.82■□□□□ 0.28
PTPN11-207ENST00000639857 KIRREL2Q6UWL6 708 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 IGFL3Q6UXB1 125 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 CEP128Q6ZU80 1094 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 PLD3Q8IV08 490 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 CEP97Q8IW35 865 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 MFSD9Q8NBP5 474 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 TM9SF4Q92544 642 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 MMABQ96EY8 250 aaPredicted RBP16.82■□□□□ 0.28
PTPN11-207ENST00000639857 OR4K3Q96R72 315 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 TRPC4Q9UBN4 977 aa16.82■□□□□ 0.28
PTPN11-207ENST00000639857 CTNNAL1Q9UBT7 734 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms