RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 OR3A3P47888 321 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 OR3A2P47893 321 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 ELOA3BQ3SY89 546 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 SCGB2B2Q4G0G5 96 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 AMZ2Q86W34 360 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 THOC6Q86W42 341 aaKnown RBP17.99■□□□□ 0.47
SCARB2-213ENST00000638680 ELOA3Q8NG57 546 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 EFCAB11Q9BUY7 163 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 PRELID1Q9Y255 219 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 J3QLW9 94 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 PLSCR1O15162 318 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 ZNF19P17023 458 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 RBM34P42696 430 aaKnown RBP17.99■□□□□ 0.47
SCARB2-213ENST00000638680 TMBIM6P55061 237 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 OR12D2P58182 307 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 DNAJB13P59910 316 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 EMX2Q04743 252 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 ABHD18Q0P651 414 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 C2CD4AQ8NCU7 369 aaPredicted RBP17.99■□□□□ 0.47
SCARB2-213ENST00000638680 FUZQ9BT04 418 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 TRIM36Q9NQ86 728 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 TCHHQ07283 1943 aa17.99■□□□□ 0.47
SCARB2-213ENST00000638680 SLC35F4A4IF30 521 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 HLA-DPB1P04440 258 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 ACADVLP49748 655 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 KLHL26Q53HC5 615 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 NPAS4Q8IUM7 802 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 PHC2Q8IXK0 858 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 DDX1Q92499 740 aaKnown RBP17.98■□□□□ 0.47
SCARB2-213ENST00000638680 HTATIP2Q9BUP3 242 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 RIOK2Q9BVS4 552 aaKnown RBP17.98■□□□□ 0.47
SCARB2-213ENST00000638680 SOX17Q9H6I2 414 aaPredicted RBP17.98■□□□□ 0.47
SCARB2-213ENST00000638680 TPT1P8Q9HAU6 139 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 DNAJC27Q9NZQ0 273 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 HCRTO43612 131 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 BDKRB1P46663 353 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 PIGFQ07326 219 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 ATP6AP1Q15904 470 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 MYLK3Q32MK0 819 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 TOR1AIP1Q5JTV8 583 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 OR2AJ1Q8NGZ0 328 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 C2orf15Q8WU43 125 aaKnown RBP17.98■□□□□ 0.47
SCARB2-213ENST00000638680 METTL21AQ8WXB1 218 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 HDAC2Q92769 488 aaKnown RBP17.98■□□□□ 0.47
SCARB2-213ENST00000638680 LYARQ9NX58 379 aaKnown RBP17.98■□□□□ 0.47
SCARB2-213ENST00000638680 HSPB11Q9Y547 144 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 ALG5Q9Y673 324 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 RPP14O95059 124 aaKnown RBP17.98■□□□□ 0.47
SCARB2-213ENST00000638680 NPPAP01160 153 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 MAP2K4P45985 399 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 DGKGP49619 791 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 TXNDC5Q8NBS9 432 aaKnown RBP17.98■□□□□ 0.47
SCARB2-213ENST00000638680 CNIH3Q8TBE1 160 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 RGMAQ96B86 450 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 SUV39H2Q9H5I1 410 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 RHCGQ9UBD6 479 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 CSNK2A2P19784 350 aaPredicted RBP17.98■□□□□ 0.47
SCARB2-213ENST00000638680 CEACAM20Q6UY09 585 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 NCCRP1Q6ZVX7 275 aaPredicted RBP17.98■□□□□ 0.47
SCARB2-213ENST00000638680 PROKR2Q8NFJ6 384 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 KIAA1191Q96A73 305 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 NUS1Q96E22 293 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 FUBP3Q96I24 572 aaKnown RBP eCLIP17.98■□□□□ 0.472e-19■■■■■ 47.5
SCARB2-213ENST00000638680 NDC1Q9BTX1 674 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 TIGARQ9NQ88 270 aa17.98■□□□□ 0.47
SCARB2-213ENST00000638680 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.97■□□□□ 0.47
SCARB2-213ENST00000638680 MAGEA2P43356 314 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 SEC13P55735 322 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 BTBD16Q32M84 506 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 CSF2P04141 144 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 GALNT2Q10471 571 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 PRAMEF14Q5SWL7 426 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 PRAMEF13Q5VWM6 474 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 NUP54Q7Z3B4 507 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 ITM2CQ9NQX7 267 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 MS4A12Q9NXJ0 267 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 SMAD9O15198 467 aaKnown RBP17.97■□□□□ 0.47
SCARB2-213ENST00000638680 SLITRK5O94991 958 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 MAT2AP31153 395 aaKnown RBP17.97■□□□□ 0.47
SCARB2-213ENST00000638680 ILF3Q12906 894 aaKnown RBP eCLIP17.97■□□□□ 0.47
SCARB2-213ENST00000638680 RGMBQ6NW40 437 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 SMG7Q92540 1137 aaKnown RBP17.97■□□□□ 0.47
SCARB2-213ENST00000638680 HERC2P3Q9BVR0 1158 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 PLCL2Q9UPR0 1127 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 C2orf92A0A1B0GVN3 265 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 MASP1P48740 699 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 EIF5AP63241 154 aaKnown RBP17.97■□□□□ 0.47
SCARB2-213ENST00000638680 CYBRD1Q53TN4 286 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 ANKRD26P1Q6NSI1 321 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 CHERPQ8IWX8 916 aaKnown RBP17.97■□□□□ 0.47
SCARB2-213ENST00000638680 PRICKLE1Q96MT3 831 aaPredicted RBP17.97■□□□□ 0.47
SCARB2-213ENST00000638680 MINDY3Q9H8M7 445 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 MSRAQ9UJ68 235 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 SLIT2O94813 1529 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 MAGEA12P43365 314 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 PAQR7Q86WK9 346 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 TREM1Q9NP99 234 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 C14orf105Q9NVL8 296 aa17.97■□□□□ 0.47
SCARB2-213ENST00000638680 DUSP11O75319 330 aaKnown RBP17.96■□□□□ 0.47
SCARB2-213ENST00000638680 JUNP05412 331 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms