RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 DNAJB8Q8NHS0 232 aa17.98■□□□□ 0.47
SMN1-211ENST00000625245 ITLN2Q8WWU7 325 aaPredicted RBP17.98■□□□□ 0.47
SMN1-211ENST00000625245 TSGA10Q9BZW7 698 aa17.98■□□□□ 0.47
SMN1-211ENST00000625245 TCRBV7S3A2A0A539 114 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 HAT1O14929 419 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 PRAMEF2O60811 474 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 F7P08709 466 aaPredicted RBP17.97■□□□□ 0.47
SMN1-211ENST00000625245 C8orf89P0DMQ9 161 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 AVPR1BP47901 424 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 ADARP55265 1226 aaKnown RBP17.97■□□□□ 0.47
SMN1-211ENST00000625245 NDUFA9Q16795 377 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 NEPROQ6NW34 567 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 CASC4Q6P4E1 433 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 TMEM205Q6UW68 189 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 CENPUQ71F23 418 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 MRGPRGQ86SM5 289 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 SPNS2Q8IVW8 549 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 REXO1L1PQ8IX06 675 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 ZNF480Q8WV37 535 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 CCDC120Q96HB5 630 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 IMMP1LQ96LU5 166 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 TUBB6Q9BUF5 446 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 RNF32Q9H0A6 362 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 ABI3Q9P2A4 366 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 TEKT2Q9UIF3 430 aa17.97■□□□□ 0.47
SMN1-211ENST00000625245 TEP1Q99973 2627 aaKnown RBP17.97■□□□□ 0.47
SMN1-211ENST00000625245 PKDREJQ9NTG1 2253 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 IGHV3-20A0A0C4DH32 117 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 CTAGE9A4FU28 777 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 OR5H15A6NDH6 313 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 E7ENX8 843 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 H7BY64 318 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 AVILO75366 819 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 SEC24DO94855 1032 aaPredicted RBP17.96■□□□□ 0.47
SMN1-211ENST00000625245 SNRPB2P08579 225 aaKnown RBP17.96■□□□□ 0.47
SMN1-211ENST00000625245 PAMP19021 973 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 TPSB2P20231 275 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 OGNP20774 298 aaKnown RBP17.96■□□□□ 0.47
SMN1-211ENST00000625245 EFNA3P52797 238 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 ABATP80404 500 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 PMP22Q01453 160 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 TAP2Q03519 686 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 RBPJQ06330 500 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 CUL1Q13616 776 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 FAM53BQ14153 422 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 TPSAB1Q15661 275 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 LONRF1Q17RB8 773 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 TTLL9Q3SXZ7 439 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 MINDY4Q4G0A6 757 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 MEI1Q5TIA1 1274 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 KIAA0930Q6ICG6 404 aaPredicted RBP17.96■□□□□ 0.47
SMN1-211ENST00000625245 DRICH1Q6PGQ1 229 aaPredicted RBP17.96■□□□□ 0.47
SMN1-211ENST00000625245 CILP2Q8IUL8 1156 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 ARHGEF39Q8N4T4 335 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 OR9A4Q8NGU2 314 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 PRAP1Q96NZ9 151 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 SLC30A3Q99726 388 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 EBNA1BP2Q99848 306 aaKnown RBP17.96■□□□□ 0.47
SMN1-211ENST00000625245 VPS9D1Q9Y2B5 631 aa17.96■□□□□ 0.47
SMN1-211ENST00000625245 VPS41P49754 854 aa17.95■□□□□ 0.46
SMN1-211ENST00000625245 CLCN7P51798 805 aa17.95■□□□□ 0.46
SMN1-211ENST00000625245 CDK16Q00536 496 aa17.95■□□□□ 0.46
SMN1-211ENST00000625245 RELAQ04206 551 aa17.95■□□□□ 0.46
SMN1-211ENST00000625245 TRIP13Q15645 432 aaPredicted RBP17.95■□□□□ 0.46
SMN1-211ENST00000625245 BTBD16Q32M84 506 aa17.95■□□□□ 0.46
SMN1-211ENST00000625245 FCRLBQ6BAA4 426 aa17.95■□□□□ 0.46
SMN1-211ENST00000625245 LANCL3Q6ZV70 420 aa17.95■□□□□ 0.46
SMN1-211ENST00000625245 CPEB2Q7Z5Q1 589 aaKnown RBP17.95■□□□□ 0.46
SMN1-211ENST00000625245 CYTH2Q99418 400 aa17.95■□□□□ 0.46
SMN1-211ENST00000625245 VN1R1Q9GZP7 353 aa17.95■□□□□ 0.46
SMN1-211ENST00000625245 CCDC68Q9H2F9 335 aa17.95■□□□□ 0.46
SMN1-211ENST00000625245 KLF2Q9Y5W3 355 aaPredicted RBP17.95■□□□□ 0.46
SMN1-211ENST00000625245 CSMD1Q96PZ7 3565 aa17.95■□□□□ 0.46
SMN1-211ENST00000625245 APCP25054 2843 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 ZBTB14O43829 449 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 FGGP02679 453 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 HTR1EP28566 365 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 CA7P43166 264 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 CASP6P55212 293 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 SNRPNP63162 240 aaKnown RBP17.94■□□□□ 0.46
SMN1-211ENST00000625245 SARNPP82979 210 aaKnown RBP17.94■□□□□ 0.46
SMN1-211ENST00000625245 THOC5Q13769 683 aaKnown RBP17.94■□□□□ 0.46
SMN1-211ENST00000625245 ZNF766Q5HY98 468 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 ZNF470Q6ECI4 717 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 ZNF808Q8N4W9 903 aaPredicted RBP17.94■□□□□ 0.46
SMN1-211ENST00000625245 PRELID2Q8N945 189 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 MCOLN3Q8TDD5 553 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 MAIP1Q8WWC4 291 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 MACROD1Q9BQ69 325 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 FBXO6Q9NRD1 293 aaPredicted RBP17.94■□□□□ 0.46
SMN1-211ENST00000625245 INTS10Q9NVR2 710 aaKnown RBP17.94■□□□□ 0.46
SMN1-211ENST00000625245 SAMD15Q9P1V8 674 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 C19orf25Q9UFG5 118 aaPredicted RBP17.94■□□□□ 0.46
SMN1-211ENST00000625245 ZKSCAN5Q9Y2L8 839 aa17.94■□□□□ 0.46
SMN1-211ENST00000625245 OR2W5A6NFC9 320 aa17.93■□□□□ 0.46
SMN1-211ENST00000625245 ST13P50502 369 aaKnown RBP17.93■□□□□ 0.46
SMN1-211ENST00000625245 CTBP1Q13363 440 aa17.93■□□□□ 0.46
SMN1-211ENST00000625245 DHX34Q14147 1143 aaKnown RBP17.93■□□□□ 0.46
SMN1-211ENST00000625245 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.93■□□□□ 0.46
SMN1-211ENST00000625245 MTFR2Q6P444 385 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms