RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ZNF225Q9UK10 706 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 KLHL20Q9Y2M5 609 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 A0A1B0GTL3 188 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 SNNO75324 88 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 CHRNGP07510 517 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 CD22P20273 847 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 MPSTP25325 297 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 VARSP26640 1264 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 MDH1P40925 334 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 HNF4AP41235 474 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 SLC1A6P48664 564 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 ERVPABLB-1P60509 514 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 SH3BP2P78314 561 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 REEP5Q00765 189 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 ZIC1Q15915 447 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 PAGE2BQ5JRK9 111 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 PHF19Q5T6S3 580 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 ATG14Q6ZNE5 492 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 MILR1Q7Z6M3 343 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 SYVN1Q86TM6 617 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 OR4F6Q8NGB9 312 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 TCTN2Q96GX1 697 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 SLC41A2Q96JW4 573 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 AIF1LQ9BQI0 150 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 SARGQ9BW04 601 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 TMEM121BQ9BXQ6 578 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 PITHD1Q9GZP4 211 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 ZNF768Q9H5H4 540 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 THAP1Q9NVV9 213 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 GEMIN8Q9NWZ8 242 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 BTRCQ9Y297 605 aa19.03■□□□□ 0.64
PDLIM2-221ENST00000622702 C1QTNF9BB2RNN3 333 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 TMX2-CTNND1H3BSU7 103 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 ITM2AO43736 263 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 C1QTNF9P0C862 333 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 CXCR2P25025 360 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 CCKBRP32239 447 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 LAPTM5Q13571 262 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 SNAP47Q5SQN1 464 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 GRHL2Q6ISB3 625 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 LETMD1Q6P1Q0 360 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 ADCK2Q7Z695 626 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 CUZD1Q86UP6 607 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 CCDC74BQ96LY2 380 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 CDK15Q96Q40 435 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 STRADBQ9C0K7 418 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 KLHL25Q9H0H3 589 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 MID1IP1Q9NPA3 183 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 TRPS1Q9UHF7 1281 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 RNF11Q9Y3C5 154 aa19.02■□□□□ 0.63
PDLIM2-221ENST00000622702 KCNE1BA0A087WTH5 132 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 NRP2O60462 931 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 HSPA4LO95757 839 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 ENO1P06733 434 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 EZRP15311 586 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 GRK3P35626 688 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 ARL1P40616 181 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 HSD11B2P80365 405 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 GUCY1A3Q02108 690 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 SLBPQ14493 270 aaKnown RBP eCLIP19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 UNQ6494/PRO21346Q6UXR6 183 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 KRT78Q8N1N4 520 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 SORT1Q99523 831 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 C20orf27Q9GZN8 174 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 NRSN2Q9GZP1 204 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 SPNS1Q9H2V7 528 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 CCDC134Q9H6E4 229 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 NT5DC2Q9H857 520 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 ZNF395Q9H8N7 513 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 HAO1Q9UJM8 370 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 PILRAQ9UKJ1 303 aa19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-221ENST00000622702 TRBC2A0A5B9 178 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 A8MU76 341 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 AGRPO00253 132 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 HAT1O14929 419 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 PRAMEF10O60809 474 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 CTSVO60911 334 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 LYPLA1O75608 230 aaPredicted RBP19■□□□□ 0.63
PDLIM2-221ENST00000622702 OR4F21O95013 312 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 FGF4P08620 206 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 NELFEP18615 380 aaKnown RBP19■□□□□ 0.63
PDLIM2-221ENST00000622702 OCRLQ01968 901 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 C3orf38Q5JPI3 329 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 FBXO42Q6P3S6 717 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 RNF44Q7L0R7 432 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 MYLK4Q86YV6 388 aaPredicted RBP19■□□□□ 0.63
PDLIM2-221ENST00000622702 D2HGDHQ8N465 521 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 ZNF740Q8NDX6 193 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 UBE2E3Q969T4 207 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 NXPE2Q96DL1 559 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 LIN37Q96GY3 246 aaPredicted RBP19■□□□□ 0.63
PDLIM2-221ENST00000622702 FAM60AQ9NP50 221 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 PDE7BQ9NP56 450 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 TNFRSF12AQ9NP84 129 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 SOHLH2Q9NX45 425 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 SATB2Q9UPW6 733 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 RAP2CQ9Y3L5 183 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 AK5Q9Y6K8 562 aa19■□□□□ 0.63
PDLIM2-221ENST00000622702 KIF26BQ2KJY2 2108 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms