RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SLC15A3Q8IY34 581 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 SPEM1Q8N4L4 309 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 DEFB119Q8N690 84 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 CDC26Q8NHZ8 85 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 DNAJB14Q8TBM8 379 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 CHTF18Q8WVB6 975 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 KLHDC7BQ96G42 594 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 SLC6A18Q96N87 628 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 CHRDQ9H2X0 955 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 ABCD2Q9UBJ2 740 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 CD300AQ9UGN4 299 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 PCOLCE2Q9UKZ9 415 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 INVSQ9Y283 1065 aa20.64■□□□□ 0.89
SPAST-204ENST00000621856 TRBV23OR9-2A0A075B6M9 112 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 H7BY64 318 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 NME4O00746 187 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 PGRP06401 933 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 SLC6A2P23975 617 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 PLIN5Q00G26 463 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 MS4A2Q01362 244 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 MAPKAPK3Q16644 382 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 ABHD11Q8NFV4 315 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 JPH3Q8WXH2 748 aaPredicted RBP20.63■□□□□ 0.89
SPAST-204ENST00000621856 GFM2Q969S9 779 aaKnown RBP20.63■□□□□ 0.89
SPAST-204ENST00000621856 ASB9Q96DX5 294 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 EGLN2Q96KS0 407 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 PRAP1Q96NZ9 151 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 OR52E6Q96RD3 313 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 OR51B5Q9H339 312 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 S100A14Q9HCY8 104 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 SLAMF8Q9P0V8 285 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 ANGPTL2Q9UKU9 493 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 TSC22D4Q9Y3Q8 395 aa20.63■□□□□ 0.89
SPAST-204ENST00000621856 ANKDD1BA6NHY2 528 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 AKAP10O43572 662 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 KCNH1O95259 989 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 F3P13726 295 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 PRPS1L1P21108 318 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 SESN3P58005 492 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 REEP5Q00765 189 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 EIF2B5Q13144 721 aaKnown RBP20.62■□□□□ 0.89
SPAST-204ENST00000621856 PWP1Q13610 501 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 TRIM25Q14258 630 aaKnown RBP20.62■□□□□ 0.89
SPAST-204ENST00000621856 PGS1Q32NB8 556 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 ADCK2Q7Z695 626 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 NRROSQ86YC3 692 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.62■□□□□ 0.89
SPAST-204ENST00000621856 UBALD2Q8IYN6 164 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 BHLHE22Q8NFJ8 381 aaPredicted RBP20.62■□□□□ 0.89
SPAST-204ENST00000621856 PJA1Q8NG27 643 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 MAFAQ8NHW3 353 aaPredicted RBP20.62■□□□□ 0.89
SPAST-204ENST00000621856 PYDC1Q8WXC3 89 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 TMEM125Q96AQ2 219 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 CMTM6Q9NX76 183 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 ZNF624Q9P2J8 865 aaPredicted RBP20.62■□□□□ 0.89
SPAST-204ENST00000621856 STX18Q9P2W9 335 aaKnown RBP20.62■□□□□ 0.89
SPAST-204ENST00000621856 ADGRE2Q9UHX3 823 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 PCDHA9Q9Y5H5 950 aa20.62■□□□□ 0.89
SPAST-204ENST00000621856 C15orf38-AP3S2A0A0A6YYH1 394 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 SPTY2D1-AS1A0A0U1RR47 76 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 BCAS2O75934 225 aaPredicted RBP20.61■□□□□ 0.89
SPAST-204ENST00000621856 ANXA4P09525 319 aaPredicted RBP20.61■□□□□ 0.89
SPAST-204ENST00000621856 TIA1P31483 386 aaKnown RBP eCLIP20.61■□□□□ 0.89
SPAST-204ENST00000621856 SHMT2P34897 504 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 RAE1P78406 368 aaKnown RBP20.61■□□□□ 0.89
SPAST-204ENST00000621856 PRDX1Q06830 199 aaKnown RBP20.61■□□□□ 0.89
SPAST-204ENST00000621856 ZNF542PQ5EBM4 170 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 C6orf10Q5SRN2 563 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 PRR23BQ6ZRT6 265 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 ARPINQ7Z6K5 226 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 GJD3Q8N144 294 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 OR2A1Q8NGT9 310 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 FAM174AQ8TBP5 190 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 LCN9Q8WX39 176 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 TESCQ96BS2 214 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 ORAI3Q9BRQ5 295 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 GSDMCQ9BYG8 508 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 PCDHAC1Q9H158 963 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 TCEAL2Q9H3H9 227 aaPredicted RBP20.61■□□□□ 0.89
SPAST-204ENST00000621856 PPT2Q9UMR5 302 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 GNG14A0A1W2PPG7 69 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 A6NCN8 305 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 SAP18O00422 153 aaKnown RBP20.61■□□□□ 0.89
SPAST-204ENST00000621856 ACOT8O14734 319 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 PCDH7O60245 1069 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 PRMT3O60678 531 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 STAMBPO95630 424 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 BAG2O95816 211 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 PTX3P26022 381 aaPredicted RBP20.61■□□□□ 0.89
SPAST-204ENST00000621856 ASMTP46597 345 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 SLC34A1Q06495 639 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 FZD2Q14332 565 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 DLEU7Q6UYE1 221 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 TRIM48Q8IWZ4 208 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 RIMKLAQ8IXN7 391 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 CLDN23Q96B33 292 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 C11orf24Q96F05 449 aaPredicted RBP20.61■□□□□ 0.89
SPAST-204ENST00000621856 PPM1MQ96MI6 270 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 TRIM8Q9BZR9 551 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 CAAP1Q9H8G2 361 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms