RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 ALCAMQ13740 583 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 BAATQ14032 418 aaPredicted RBP2.2□□□□□ -2.06
TARDBP-220ENST00000618606 KRT33BQ14525 404 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 CDC37Q16543 378 aaPredicted RBP2.2□□□□□ -2.06
TARDBP-220ENST00000618606 C3AR1Q16581 482 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 EIPR1Q53HC9 387 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 TCP11X2Q5H9J9 407 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 CES4AQ5XG92 561 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 DMKNQ6E0U4 476 aaPredicted RBP2.2□□□□□ -2.06
TARDBP-220ENST00000618606 NOTUMQ6P988 496 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 FIGLAQ6QHK4 219 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 FAM198BQ6UWH4 519 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 ZNF841Q6ZN19 808 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 Q6ZVH6 145 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 GLRX5Q86SX6 157 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 SLC25A42Q86VD7 318 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 NUDT13Q86X67 352 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 CFAP206Q8IYR0 622 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 CHCHD4Q8N4Q1 142 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 NAT8LQ8N9F0 302 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 SUMF1Q8NBK3 374 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 OR13C3Q8NGS6 347 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 MGARPQ8TDB4 240 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 NPRL2Q8WTW4 380 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 PTERQ96BW5 349 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 ATXN7L3BQ96GX2 97 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 CDRT15Q96T59 188 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 LGMNQ99538 433 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 OVOL2Q9BRP0 275 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 NAA11Q9BSU3 229 aaPredicted RBP2.2□□□□□ -2.06
TARDBP-220ENST00000618606 URM1Q9BTM9 101 aaKnown RBP2.2□□□□□ -2.06
TARDBP-220ENST00000618606 KIFC3Q9BVG8 833 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 CCDC106Q9BWC9 280 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 FAM49AQ9H0Q0 323 aaPredicted RBP2.2□□□□□ -2.06
TARDBP-220ENST00000618606 B3GAT2Q9NPZ5 323 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 SERINC1Q9NRX5 453 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 CWC25Q9NXE8 425 aaPredicted RBP2.2□□□□□ -2.06
TARDBP-220ENST00000618606 THAP10Q9P2Z0 257 aaPredicted RBP2.2□□□□□ -2.06
TARDBP-220ENST00000618606 GTF3C4Q9UKN8 822 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 TRIM17Q9Y577 477 aa2.2□□□□□ -2.06
TARDBP-220ENST00000618606 PCDH11YQ9BZA8 1340 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 LNP1A1A4G5 178 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 ZNF840PA6NDX5 716 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 LRRC72A6NJI9 287 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 SHISA9B4DS77 424 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 H0YAE9 185 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 GALR3O60755 368 aaPredicted RBP2.19□□□□□ -2.06
TARDBP-220ENST00000618606 ZWINTO95229 277 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 SLU7O95391 586 aaKnown RBP2.19□□□□□ -2.06
TARDBP-220ENST00000618606 POP4O95707 220 aaKnown RBP2.19□□□□□ -2.06
TARDBP-220ENST00000618606 PRB2P02812 416 aaPredicted RBP2.19□□□□□ -2.06
TARDBP-220ENST00000618606 CDH3P22223 829 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 PTAFRP25105 342 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 GP5P40197 560 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 C17orf67Q0P5P2 114 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 NFE2L1Q14494 772 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 ZNF74Q16587 644 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 PRR30Q53SZ7 412 aaPredicted RBP2.19□□□□□ -2.06
TARDBP-220ENST00000618606 MPP7Q5T2T1 576 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 C6orf163Q5TEZ5 329 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 TMEM211Q6ICI0 200 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 KRT80Q6KB66 452 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 UGT3A1Q6NUS8 523 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 PLBD1Q6P4A8 553 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 PARP8Q8N3A8 854 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 PI4KAP1Q8N8J0 262 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 TC2NQ8N9U0 490 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 OR11H4Q8NGC9 324 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 KIF18AQ8NI77 898 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 PTPMT1Q8WUK0 201 aaPredicted RBP2.19□□□□□ -2.06
TARDBP-220ENST00000618606 CCDC107Q8WV48 283 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 TEKT4Q8WW24 435 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 CNOT6LQ96LI5 555 aaKnown RBP2.19□□□□□ -2.06
TARDBP-220ENST00000618606 CEP295NLQ96MC4 621 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 GBP5Q96PP8 586 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 NEK1Q96PY6 1258 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 SPAG5Q96R06 1193 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 HOXD1Q9GZZ0 328 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 MIS12Q9H081 205 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 SLITRK2Q9H156 845 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 C2orf40Q9H1Z8 148 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 PARLQ9H300 379 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 KCNK15Q9H427 330 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 CRNNQ9UBG3 495 aaPredicted RBP2.19□□□□□ -2.06
TARDBP-220ENST00000618606 B4GALT7Q9UBV7 327 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 GRIP1Q9Y3R0 1128 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 POMT1Q9Y6A1 747 aa2.19□□□□□ -2.06
TARDBP-220ENST00000618606 GPR75-ASB3A0A0A6YYF3 556 aa2.18□□□□□ -2.06
TARDBP-220ENST00000618606 TRAV34A0A0B4J273 112 aa2.18□□□□□ -2.06
TARDBP-220ENST00000618606 A4D1N5 150 aa2.18□□□□□ -2.06
TARDBP-220ENST00000618606 GOSR1O95249 250 aa2.18□□□□□ -2.06
TARDBP-220ENST00000618606 PENKP01210 267 aaPredicted RBP2.18□□□□□ -2.06
TARDBP-220ENST00000618606 CCDC175P0C221 793 aa2.18□□□□□ -2.06
TARDBP-220ENST00000618606 FDPSP14324 419 aaKnown RBP2.18□□□□□ -2.06
TARDBP-220ENST00000618606 ZBTB25P24278 435 aa2.18□□□□□ -2.06
TARDBP-220ENST00000618606 CCR3P51677 355 aa2.18□□□□□ -2.06
TARDBP-220ENST00000618606 CSE1LP55060 971 aaKnown RBP2.18□□□□□ -2.06
TARDBP-220ENST00000618606 CDH13P55290 713 aa2.18□□□□□ -2.06
TARDBP-220ENST00000618606 XGP55808 180 aa2.18□□□□□ -2.06
TARDBP-220ENST00000618606 CXCL9Q07325 125 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms