RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 OSTF1Q92882 214 aa9.99□□□□□ -0.81
CUL4A-212ENST00000617546 TTLL2Q9BWV7 592 aa9.99□□□□□ -0.81
CUL4A-212ENST00000617546 TP63Q9H3D4 680 aaPredicted RBP9.99□□□□□ -0.81
CUL4A-212ENST00000617546 NEUROD4Q9HD90 331 aa9.99□□□□□ -0.81
CUL4A-212ENST00000617546 PRDM5Q9NQX1 630 aaPredicted RBP9.99□□□□□ -0.81
CUL4A-212ENST00000617546 NUDT15Q9NV35 164 aa9.99□□□□□ -0.81
CUL4A-212ENST00000617546 MGAT4AQ9UM21 535 aa9.99□□□□□ -0.81
CUL4A-212ENST00000617546 H3BM21 787 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 LRRTM2O43300 516 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 CD2P06729 351 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 CD1DP15813 335 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 CPOXP36551 454 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 GPR1P46091 355 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 CLK3P49761 638 aaKnown RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 DGKQP52824 942 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 APOFQ13790 326 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 RNASE12Q5GAN4 147 aaKnown RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 SIRPB2Q5JXA9 342 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 PIAS4Q8N2W9 510 aaPredicted RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 NETO2Q8NC67 525 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 TTLQ8NG68 377 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 TBC1D15Q8TC07 691 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 FUBP3Q96I24 572 aaKnown RBP eCLIP9.98□□□□□ -0.812e-6■■■□□ 17
CUL4A-212ENST00000617546 ZNF285Q96NJ3 590 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 SORT1Q99523 831 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 TPT1P8Q9HAU6 139 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 FAM105AQ9NUU6 356 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 ZNF639Q9UID6 485 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 ARFGEF2Q9Y6D5 1785 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 CLCA1A8K7I4 914 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 CHURC1-FNTBB4DL54 471 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 PPEF2O14830 753 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 PRAF2O60831 178 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 SAGP10523 405 aaPredicted RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 BMP1P13497 986 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 GCAP28676 217 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 SGCGQ13326 291 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 NAE1Q13564 534 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 RCAN2Q14206 197 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 CBX2Q14781 532 aaPredicted RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 VMACQ2NL98 169 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 FAM76BQ5HYJ3 339 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 SLC22A10Q63ZE4 541 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 SPRED1Q7Z699 444 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 COMMD7Q86VX2 200 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 NLE1Q9NVX2 485 aaPredicted RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 RICTORQ6R327 1708 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 TRAV19A0A0A6YYK7 116 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 PRAMEF17Q5VTA0 474 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 FRRS1Q6ZNA5 592 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 NPAS3Q8IXF0 933 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 TIGD4Q8IY51 512 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 METTL25Q8N6Q8 603 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 C1orf216Q8TAB5 229 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 MUL1Q969V5 352 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 DPEP3Q9H4B8 488 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 GRM6O15303 877 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 PI15O43692 258 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 DPEP1P16444 411 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 ZNF3P17036 446 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 HK1P19367 917 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 UGT2B10P36537 528 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 LILRA4P59901 499 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 SLC10A7Q0GE19 358 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 CDK5R2Q13319 367 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 RHEBQ15382 184 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 RAB12Q6IQ22 244 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 PYHIN1Q6K0P9 492 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 METTL2BQ6P1Q9 378 aaKnown RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 DUS1LQ6P1R4 473 aaKnown RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 PDZD9Q8IXQ8 264 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 PPP1R14AQ96A00 147 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 S100A16Q96FQ6 103 aaKnown RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 MCMBPQ9BTE3 642 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 TSSK6Q9BXA6 273 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 SDR39U1Q9NRG7 319 aaPredicted RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 QPCTLQ9NXS2 382 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 RNF181Q9P0P0 153 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 ZNF541Q9H0D2 1346 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 PHRF1Q9P1Y6 1649 aaKnown RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 IRF6O14896 467 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 ERAL1O75616 437 aaKnown RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 ZNF432O94892 652 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 MT-ND5P03915 603 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 H2AFB2P0C5Z0 115 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 S100A2P29034 98 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 ADCYAP1R1P41586 468 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 C4orf46Q504U0 113 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 PAQR7Q86WK9 346 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 KDM1BQ8NB78 822 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 ZNF384Q8TF68 577 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 TSEN15Q8WW01 171 aaKnown RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 CIDECQ96AQ7 238 aaPredicted RBP9.98□□□□□ -0.81
CUL4A-212ENST00000617546 TXNDC15Q96J42 360 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 PGLYRP2Q96PD5 576 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 CD244Q9BZW8 370 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 GORASP2Q9H8Y8 452 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 AMBNQ9NP70 447 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 GALPQ9UBC7 116 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms