RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 RNF32Q9H0A6 362 aa16.93■□□□□ 0.3
SMN2-213ENST00000614240 CCDC68Q9H2F9 335 aa16.93■□□□□ 0.3
SMN2-213ENST00000614240 SYNPO2LQ9H987 977 aa16.93■□□□□ 0.3
SMN2-213ENST00000614240 SAMD15Q9P1V8 674 aa16.93■□□□□ 0.3
SMN2-213ENST00000614240 ABI3Q9P2A4 366 aa16.93■□□□□ 0.3
SMN2-213ENST00000614240 SH3BGRL2Q9UJC5 107 aa16.93■□□□□ 0.3
SMN2-213ENST00000614240 CTAGE9A4FU28 777 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 OR5H15A6NDH6 313 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 A8MUI8 341 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 HAT1O14929 419 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 PRAMEF2O60811 474 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 SLC16A8O95907 504 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 STATHP02808 62 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 MST1P26927 711 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 KCNJ1P48048 391 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 SRSF11Q05519 484 aaKnown RBP16.92■□□□□ 0.3
SMN2-213ENST00000614240 FAM53BQ14153 422 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 KCNJ11Q14654 390 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 SIX1Q15475 284 aaPredicted RBP16.92■□□□□ 0.3
SMN2-213ENST00000614240 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.92■□□□□ 0.3
SMN2-213ENST00000614240 MINDY4Q4G0A6 757 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 MEI1Q5TIA1 1274 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 MTFR2Q6P444 385 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 TMEM205Q6UW68 189 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 NEK10Q6ZWH5 1172 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 MRGPRGQ86SM5 289 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 PLD3Q8IV08 490 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 MCOLN3Q8TDD5 553 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 ZNF480Q8WV37 535 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 ZKSCAN5Q9Y2L8 839 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 NBPF19A0A087WUL8 3843 aa16.92■□□□□ 0.3
SMN2-213ENST00000614240 E7ENX8 843 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 H7BY64 318 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 P2RX6O15547 441 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 AVILO75366 819 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 SEC24DO94855 1032 aaPredicted RBP16.91■□□□□ 0.3
SMN2-213ENST00000614240 FGGP02679 453 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 TPSB2P20231 275 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 TAP2Q03519 686 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 RELAQ04206 551 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 CUL1Q13616 776 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 THOC5Q13769 683 aaKnown RBP16.91■□□□□ 0.3
SMN2-213ENST00000614240 TRIP13Q15645 432 aaPredicted RBP16.91■□□□□ 0.3
SMN2-213ENST00000614240 TPSAB1Q15661 275 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 BTBD16Q32M84 506 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 CENPUQ71F23 418 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 CILP2Q8IUL8 1156 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 OR9A4Q8NGU2 314 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 ITLN2Q8WWU7 325 aaPredicted RBP16.91■□□□□ 0.3
SMN2-213ENST00000614240 IMMP1LQ96LU5 166 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 PRAP1Q96NZ9 151 aa16.91■□□□□ 0.3
SMN2-213ENST00000614240 INTS10Q9NVR2 710 aaKnown RBP16.91■□□□□ 0.3
SMN2-213ENST00000614240 C19orf25Q9UFG5 118 aaPredicted RBP16.91■□□□□ 0.3
SMN2-213ENST00000614240 KLF2Q9Y5W3 355 aaPredicted RBP16.91■□□□□ 0.3
SMN2-213ENST00000614240 IGHV3-20A0A0C4DH32 117 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 GOLGA6L6A8MZA4 724 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 ZBTB14O43829 449 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 GRNP28799 593 aaKnown RBP16.9■□□□□ 0.3
SMN2-213ENST00000614240 VPS41P49754 854 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 CLCN7P51798 805 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 DHX34Q14147 1143 aaKnown RBP16.9■□□□□ 0.3
SMN2-213ENST00000614240 KCTD19Q17RG1 926 aaPredicted RBP16.9■□□□□ 0.3
SMN2-213ENST00000614240 ZNF470Q6ECI4 717 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 CPEB2Q7Z5Q1 589 aaKnown RBP16.9■□□□□ 0.3
SMN2-213ENST00000614240 ZNF808Q8N4W9 903 aaPredicted RBP16.9■□□□□ 0.3
SMN2-213ENST00000614240 PRELID2Q8N945 189 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 ASB11Q8WXH4 323 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 CCDC120Q96HB5 630 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 CYTH2Q99418 400 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 VN1R1Q9GZP7 353 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 ABCA12Q86UK0 2595 aa16.9■□□□□ 0.3
SMN2-213ENST00000614240 CRYBG3Q68DQ2 2970 aa16.89■□□□□ 0.3
SMN2-213ENST00000614240 TCRBV7S3A2A0A539 114 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 H0YIG0 161 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 SNRPB2P08579 225 aaKnown RBP16.89■□□□□ 0.29
SMN2-213ENST00000614240 MPC1LP0DKB6 136 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 ESRRAP11474 423 aaPredicted RBP16.89■□□□□ 0.29
SMN2-213ENST00000614240 ENO3P13929 434 aaPredicted RBP16.89■□□□□ 0.29
SMN2-213ENST00000614240 HRH2P25021 359 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 HTR1EP28566 365 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 ZNF766Q5HY98 468 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 RPTNQ6XPR3 784 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 ARHGEF39Q8N4T4 335 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 AMER2Q8N7J2 671 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 FBXO15Q8NCQ5 510 aaPredicted RBP16.89■□□□□ 0.29
SMN2-213ENST00000614240 ZNF669Q96BR6 464 aaPredicted RBP16.89■□□□□ 0.29
SMN2-213ENST00000614240 ZNF354BQ96LW1 612 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 SLC30A3Q99726 388 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 KCNK13Q9HB14 408 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 CHST11Q9NPF2 352 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 HOMER3Q9NSC5 361 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 TMEM184CQ9NVA4 438 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 HCN3Q9P1Z3 774 aa16.89■□□□□ 0.29
SMN2-213ENST00000614240 TTI1O43156 1089 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 CEP104O60308 925 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 F7P08709 466 aaPredicted RBP16.88■□□□□ 0.29
SMN2-213ENST00000614240 COX6B1P14854 86 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 CA7P43166 264 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 XCR1P46094 333 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 RPS15AP62244 130 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms