RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 TMEM205Q6UW68 189 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 RIPOR1Q6ZS17 1223 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 UBE2R2Q712K3 238 aaPredicted RBP7.23□□□□□ -1.25
CUX1-219ENST00000606749 MAMDC2Q7Z304 686 aaPredicted RBP7.23□□□□□ -1.25
CUX1-219ENST00000606749 PIWIL4Q7Z3Z4 852 aaKnown RBP7.23□□□□□ -1.25
CUX1-219ENST00000606749 ADCK2Q7Z695 626 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 PLD3Q8IV08 490 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 CPNE9Q8IYJ1 553 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 AMER2Q8N7J2 671 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 OR1N1Q8NGS0 311 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 MCOLN3Q8TDD5 553 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 ACTRT1Q8TDG2 376 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 BRIX1Q8TDN6 353 aaKnown RBP7.23□□□□□ -1.25
CUX1-219ENST00000606749 EEF1AKMT1Q8WVE0 214 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 HAS2Q92819 552 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 NAP1L3Q99457 506 aaPredicted RBP7.23□□□□□ -1.25
CUX1-219ENST00000606749 AARSD1Q9BTE6 412 aaKnown RBP7.23□□□□□ -1.25
CUX1-219ENST00000606749 ZNF700Q9H0M5 742 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 IARS2Q9NSE4 1012 aaKnown RBP7.23□□□□□ -1.25
CUX1-219ENST00000606749 TMEM184CQ9NVA4 438 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 C14orf105Q9NVL8 296 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 PLA2G3Q9NZ20 509 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 PTGFRNQ9P2B2 879 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 MKL2Q9ULH7 1088 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 PDE10AQ9Y233 779 aa7.23□□□□□ -1.25
CUX1-219ENST00000606749 MRPS2Q9Y399 296 aaKnown RBP7.23□□□□□ -1.25
CUX1-219ENST00000606749 DYTNA2CJ06 578 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 H0YIG0 161 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 PGRMC1O00264 195 aaKnown RBP7.22□□□□□ -1.25
CUX1-219ENST00000606749 EIF3FO00303 357 aaPredicted RBP7.22□□□□□ -1.25
CUX1-219ENST00000606749 E2F3O00716 465 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 NRDCO43847 1150 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 LCMT2O60294 686 aaKnown RBP7.22□□□□□ -1.25
CUX1-219ENST00000606749 WFS1O76024 890 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 AHSGP02765 367 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 STATHP02808 62 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 SERPINA7P05543 415 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 CELA2AP08217 269 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 ITGAMP11215 1152 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 ICAM2P13598 275 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 EDN3P14138 238 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 FDXRP22570 491 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 GABRB3P28472 473 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 SOX11P35716 441 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 AVPR1BP47901 424 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 FNTAP49354 379 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 TNFSF10P50591 281 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 EFNA3P52797 238 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 RPS15AP62244 130 aaKnown RBP7.22□□□□□ -1.25
CUX1-219ENST00000606749 ARG2P78540 354 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 MAT1AQ00266 395 aaKnown RBP7.22□□□□□ -1.25
CUX1-219ENST00000606749 EEF1A2Q05639 463 aaKnown RBP7.22□□□□□ -1.25
CUX1-219ENST00000606749 PTK6Q13882 451 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 PCOLCEQ15113 449 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 RNASEH2BQ5TBB1 312 aaKnown RBP7.22□□□□□ -1.25
CUX1-219ENST00000606749 ZNF324BQ6AW86 544 aaPredicted RBP7.22□□□□□ -1.25
CUX1-219ENST00000606749 UGT3A1Q6NUS8 523 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 PAQR3Q6TCH7 311 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 FAM180AQ6UWF9 173 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 PRSS41Q7RTY9 318 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 VN1R4Q7Z5H5 301 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 LURAP1LQ8IV03 231 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 ZC3H7AQ8IWR0 971 aaKnown RBP7.22□□□□□ -1.25
CUX1-219ENST00000606749 PPIL6Q8IXY8 311 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 SHISA5Q8N114 240 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 SIRT6Q8N6T7 355 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.22□□□□□ -1.25
CUX1-219ENST00000606749 C2CD4AQ8NCU7 369 aaPredicted RBP7.22□□□□□ -1.25
CUX1-219ENST00000606749 OR9A4Q8NGU2 314 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 GRK7Q8WTQ7 553 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 TM4SF19Q96DZ7 209 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 THAP11Q96EK4 314 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 IMMP1LQ96LU5 166 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 CCDC138Q96M89 665 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 OSBPL9Q96SU4 736 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 CYTH2Q99418 400 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 NDNQ99608 321 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 MACROD1Q9BQ69 325 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 FAM167BQ9BTA0 163 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 VN1R1Q9GZP7 353 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 PCBD2Q9H0N5 130 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 PARVBQ9HBI1 364 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 RIC8BQ9NVN3 520 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 STMN3Q9NZ72 180 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 ADAMTS6Q9UKP5 1117 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 SH2B3Q9UQQ2 575 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 OSGIN2Q9Y236 505 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 CNTRLQ7Z7A1 2325 aa7.22□□□□□ -1.25
CUX1-219ENST00000606749 HIVEP3Q5T1R4 2406 aa7.21□□□□□ -1.25
CUX1-219ENST00000606749 TRAV17A0A0B4J275 112 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 OR2W5A6NFC9 320 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 SLC16A5O15375 505 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 LRRTM2O43300 516 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 JRKO75564 520 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 NSA2O95478 260 aaKnown RBP7.21□□□□□ -1.26
CUX1-219ENST00000606749 TTC4O95801 387 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 WDPCPO95876 746 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 C8GP07360 202 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 STSP08842 583 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 C8orf89P0DMQ9 161 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms