RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 PCOLCEQ15113 449 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 ZRSR2Q15696 482 aaKnown RBP12.48□□□□□ -0.41
RPS28-204ENST00000602140 ZNF324BQ6AW86 544 aaPredicted RBP12.48□□□□□ -0.41
RPS28-204ENST00000602140 ZNF549Q6P9A3 640 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 RIPOR1Q6ZS17 1223 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 ZNF662Q6ZS27 426 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 FJX1Q86VR8 437 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 ZC3H7AQ8IWR0 971 aaKnown RBP12.48□□□□□ -0.41
RPS28-204ENST00000602140 TRIM58Q8NG06 486 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 KCNJ9Q92806 393 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 TAAR6Q96RI8 345 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 EBNA1BP2Q99848 306 aaKnown RBP12.48□□□□□ -0.41
RPS28-204ENST00000602140 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.48□□□□□ -0.411e-6■■□□□ 11.9
RPS28-204ENST00000602140 ZNF700Q9H0M5 742 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 KLHL42Q9P2K6 505 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 MED16Q9Y2X0 877 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 DHRS7Q9Y394 339 aa12.48□□□□□ -0.41
RPS28-204ENST00000602140 MRPS2Q9Y399 296 aaKnown RBP12.48□□□□□ -0.41
RPS28-204ENST00000602140 ZCWPW2A0A1B0GU75 182 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 A0A1B0GUH1 482 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 SDR42E2A6NKP2 422 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 ENO4A6NNW6 628 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 GOLGA8MH3BSY2 632 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 H7BY64 318 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 ZBTB14O43829 449 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 KIF5CO60282 957 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 WDPCPO95876 746 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 MLNP12872 115 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 ENO3P13929 434 aaPredicted RBP12.47□□□□□ -0.41
RPS28-204ENST00000602140 TDGF1P3P51864 188 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 KCNK10P57789 538 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 SNRPNP63162 240 aaKnown RBP12.47□□□□□ -0.41
RPS28-204ENST00000602140 FAM53BQ14153 422 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 NDUFA9Q16795 377 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 C1QL3Q5VWW1 255 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 TTC27Q6P3X3 843 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 TMEM205Q6UW68 189 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 CYHR1Q6ZMK1 362 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 LRRC56Q8IYG6 542 aaPredicted RBP12.47□□□□□ -0.41
RPS28-204ENST00000602140 SLC34A3Q8N130 599 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 OR9A4Q8NGU2 314 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 NR4A3Q92570 626 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 PRAP1Q96NZ9 151 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 GPR21Q99679 349 aa12.47□□□□□ -0.41
RPS28-204ENST00000602140 C8orf89P0DMQ9 161 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 ICAM2P13598 275 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 IMPA1P29218 277 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 SKIV2L2P42285 1042 aaKnown RBP12.46□□□□□ -0.41
RPS28-204ENST00000602140 SLC1A2P43004 574 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 AVPR1BP47901 424 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 AP2B1P63010 937 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 SRSF11Q05519 484 aaKnown RBP12.46□□□□□ -0.41
RPS28-204ENST00000602140 INAQ16352 499 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 ABHD17BQ5VST6 288 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 HIBCHQ6NVY1 386 aaPredicted RBP12.46□□□□□ -0.41
RPS28-204ENST00000602140 GFRALQ6UXV0 394 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 UBE2R2Q712K3 238 aaPredicted RBP12.46□□□□□ -0.41
RPS28-204ENST00000602140 PIWIL4Q7Z3Z4 852 aaKnown RBP12.46□□□□□ -0.41
RPS28-204ENST00000602140 TICAM1Q8IUC6 712 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 CPNE9Q8IYJ1 553 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 MCUQ8NE86 351 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 CD200R1Q8TD46 325 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 METTL21AQ8WXB1 218 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 MAGOHBQ96A72 148 aaKnown RBP12.46□□□□□ -0.41
RPS28-204ENST00000602140 IMMP1LQ96LU5 166 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 SERPINB12Q96P63 405 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 TUBB6Q9BUF5 446 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 VN1R1Q9GZP7 353 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 XAB2Q9HCS7 855 aaKnown RBP12.46□□□□□ -0.41
RPS28-204ENST00000602140 C20orf96Q9NUD7 363 aaPredicted RBP12.46□□□□□ -0.41
RPS28-204ENST00000602140 TMEM184CQ9NVA4 438 aa12.46□□□□□ -0.41
RPS28-204ENST00000602140 CREBBPQ92793 2442 aa12.46□□□□□ -0.42
RPS28-204ENST00000602140 IGHV3-20A0A0C4DH32 117 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 ARHGAP10A1A4S6 786 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 H0YIG0 161 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 SEC24DO94855 1032 aaPredicted RBP12.45□□□□□ -0.42
RPS28-204ENST00000602140 HAUS5O94927 633 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 RASAL1O95294 804 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 NSA2O95478 260 aaKnown RBP12.45□□□□□ -0.42
RPS28-204ENST00000602140 RPS15AP62244 130 aaKnown RBP12.45□□□□□ -0.42
RPS28-204ENST00000602140 TBPL1P62380 186 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 MPP1Q00013 466 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 LONRF1Q17RB8 773 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 MINDY4Q4G0A6 757 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 MFSD4BQ5TF39 518 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 LANCL3Q6ZV70 420 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 PRSS41Q7RTY9 318 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 VN1R4Q7Z5H5 301 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 SHISA5Q8N114 240 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 AGGF1Q8N302 714 aaeCLIP12.45□□□□□ -0.42
RPS28-204ENST00000602140 SUN3Q8TAQ9 357 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 CALML6Q8TD86 181 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 RELTQ969Z4 430 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 MARVELD3Q96A59 401 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 CYTH2Q99418 400 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 MACROD1Q9BQ69 325 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 RNF32Q9H0A6 362 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 CCDC177Q9NQR7 707 aaPredicted RBP12.45□□□□□ -0.42
RPS28-204ENST00000602140 STMN3Q9NZ72 180 aa12.45□□□□□ -0.42
RPS28-204ENST00000602140 FBXO5Q9UKT4 447 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms