RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CPSF7Q8N684 471 aaKnown RBP21.69■■□□□ 1.06
IRF3-228ENST00000601291 RSC1A1Q92681 617 aa21.69■■□□□ 1.06
IRF3-228ENST00000601291 MARK4Q96L34 752 aa21.69■■□□□ 1.06
IRF3-228ENST00000601291 GTPBP2Q9BX10 602 aaKnown RBP21.69■■□□□ 1.06
IRF3-228ENST00000601291 NMRK1Q9NWW6 199 aa21.69■■□□□ 1.06
IRF3-228ENST00000601291 C1orf109Q9NX04 203 aa21.69■■□□□ 1.06
IRF3-228ENST00000601291 ANKMY1Q9P2S6 941 aa21.69■■□□□ 1.06
IRF3-228ENST00000601291 RNF215Q9Y6U7 377 aa21.69■■□□□ 1.06
IRF3-228ENST00000601291 TRBC2A0A5B9 178 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 ANKDD1BA6NHY2 528 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 MAGEB17A8MXT2 336 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 SLC22A2O15244 555 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 PROS1P07225 676 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 GLB1P16278 677 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 PRPH2P23942 346 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 CAPZBP47756 277 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 PPM1FP49593 454 aaPredicted RBP21.68■■□□□ 1.06
IRF3-228ENST00000601291 ATXN3P54252 364 aaPredicted RBP21.68■■□□□ 1.06
IRF3-228ENST00000601291 SQLEQ14534 574 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 TTLQ8NG68 377 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 CMTM7Q96FZ5 175 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 CCDC106Q9BWC9 280 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 SLC12A4Q9UP95 1085 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 COPG1Q9Y678 874 aaKnown RBP21.68■■□□□ 1.06
IRF3-228ENST00000601291 CAPN7Q9Y6W3 813 aa21.68■■□□□ 1.06
IRF3-228ENST00000601291 PCDH15Q96QU1 1955 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 A0A0J9YY10 115 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 NPIPB8E9PQR5 432 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 ZW10O43264 779 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 OR1F1O43749 312 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 SEC22BO75396 215 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 UBOX5O94941 541 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 ALDOCP09972 364 aaKnown RBP21.67■■□□□ 1.06
IRF3-228ENST00000601291 IDO1P14902 403 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 ENGP17813 658 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 GSTM2P28161 218 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 ADSLP30566 484 aaPredicted RBP21.67■■□□□ 1.06
IRF3-228ENST00000601291 GRIA3P42263 894 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 ATP4BP51164 291 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 RPL38P63173 70 aaKnown RBP21.67■■□□□ 1.06
IRF3-228ENST00000601291 EMX2Q04743 252 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 GSTA3Q16772 222 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 ZNF425Q6IV72 752 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 TRIM73Q86UV7 250 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 ZFAND4Q86XD8 727 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.67■■□□□ 1.06
IRF3-228ENST00000601291 RHBGQ9H310 441 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 ZNF385DQ9H6B1 395 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 DMRT3Q9NQL9 472 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 NOP53Q9NZM5 478 aaKnown RBP21.67■■□□□ 1.06
IRF3-228ENST00000601291 VPS29Q9UBQ0 182 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 CACNA1EQ15878 2313 aa21.67■■□□□ 1.06
IRF3-228ENST00000601291 FEZF1A0PJY2 475 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 RPS13P62277 151 aaKnown RBP21.66■■□□□ 1.06
IRF3-228ENST00000601291 NR0B2Q15466 257 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 CCDC6Q16204 474 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 ADNP2Q6IQ32 1131 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 ZNF438Q7Z4V0 828 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 YTHDF3Q7Z739 585 aaKnown RBP21.66■■□□□ 1.06
IRF3-228ENST00000601291 PARP9Q8IXQ6 854 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 RNF175Q8N4F7 328 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 OR6C4Q8NGE1 309 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 PRRX2Q99811 253 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 SMOC1Q9H4F8 434 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 EPB41L1Q9H4G0 881 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 POMT2Q9UKY4 750 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 PADI4Q9UM07 663 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 PPT2Q9UMR5 302 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 EIF3LQ9Y262 564 aaKnown RBP21.66■■□□□ 1.06
IRF3-228ENST00000601291 TMED5Q9Y3A6 229 aa21.66■■□□□ 1.06
IRF3-228ENST00000601291 TRIM38O00635 465 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 HAT1O14929 419 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 TNFSF14O43557 240 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 PCDHGA12O60330 932 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 EZRP15311 586 aaKnown RBP21.65■■□□□ 1.06
IRF3-228ENST00000601291 MAGP20916 626 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 GPR3P46089 330 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 SCTRP47872 440 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 KRT72Q14CN4 511 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 RPS6KA2Q15349 733 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 PAQR7Q86WK9 346 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 MINDY1Q8N5J2 469 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 OR2I1PQ8NGU4 316 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 ZUFSPQ96AP4 578 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 AHCYL2Q96HN2 611 aaKnown RBP21.65■■□□□ 1.06
IRF3-228ENST00000601291 METTL2AQ96IZ6 378 aaKnown RBP21.65■■□□□ 1.06
IRF3-228ENST00000601291 SERPINI1Q99574 410 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 TUBB6Q9BUF5 446 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 C1orf50Q9BV19 199 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 SARGQ9BW04 601 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 KLHL20Q9Y2M5 609 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 SDK1Q7Z5N4 2213 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 PCM1Q15154 2024 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 CAPN14A8MX76 684 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 MAPK1P28482 360 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 ALDH4A1P30038 563 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 KLF10Q13118 480 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 RFTN2Q52LD8 501 aaPredicted RBP21.65■■□□□ 1.06
IRF3-228ENST00000601291 PLA2G2CQ5R387 149 aa21.65■■□□□ 1.06
IRF3-228ENST00000601291 ANKRD53Q8N9V6 530 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms