RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 CDKL4Q5MAI5 379 aa16.08■□□□□ 0.16
TRIM28-215ENST00000601150 KLHDC8AQ8IYD2 350 aa16.08■□□□□ 0.16
TRIM28-215ENST00000601150 STAG3L4Q8TBR4 150 aa16.08■□□□□ 0.16
TRIM28-215ENST00000601150 SLC5A11Q8WWX8 675 aa16.08■□□□□ 0.16
TRIM28-215ENST00000601150 CABS1Q96KC9 395 aa16.08■□□□□ 0.16
TRIM28-215ENST00000601150 ALG9Q9H6U8 611 aa16.08■□□□□ 0.16
TRIM28-215ENST00000601150 RNF112Q9ULX5 631 aa16.08■□□□□ 0.16
TRIM28-215ENST00000601150 POLHQ9Y253 713 aa16.08■□□□□ 0.16
TRIM28-215ENST00000601150 RUVBL1Q9Y265 456 aaKnown RBP16.08■□□□□ 0.16
TRIM28-215ENST00000601150 SLC22A14Q9Y267 594 aa16.08■□□□□ 0.16
TRIM28-215ENST00000601150 NCF1BA6NI72 391 aaPredicted RBP16.07■□□□□ 0.16
TRIM28-215ENST00000601150 NCF1CA8MVU1 366 aaPredicted RBP16.07■□□□□ 0.16
TRIM28-215ENST00000601150 TK2O00142 265 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 S100BP04271 92 aaPredicted RBP16.07■□□□□ 0.16
TRIM28-215ENST00000601150 C2P06681 752 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 NCF1P14598 390 aaPredicted RBP16.07■□□□□ 0.16
TRIM28-215ENST00000601150 TFEBP19484 476 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 ITGAXP20702 1163 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 CNTFP26441 200 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 TYK2P29597 1187 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 CCR10P46092 362 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 CSRP3P50461 194 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 IL10RAQ13651 578 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 HKDC1Q2TB90 917 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 GARNL3Q5VVW2 1013 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 SULT1C3Q6IMI6 304 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 PRMT9Q6P2P2 845 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 TBC1D19Q8N5T2 526 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 OR4K1Q8NGD4 311 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 SLC39A7Q92504 469 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 NEIL2Q969S2 332 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 FKBP10Q96AY3 582 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 C10orf90Q96M02 699 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 TSNARE1Q96NA8 513 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 TXLNGYQ9BZA5 131 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 CNOT10Q9H9A5 744 aaKnown RBP16.07■□□□□ 0.16
TRIM28-215ENST00000601150 SLC22A11Q9NSA0 550 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 IGSF5Q9NSI5 407 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 WWOXQ9NZC7 414 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 CD274Q9NZQ7 290 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 ZNF180Q9UJW8 692 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 KCNE2Q9Y6J6 123 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 LOC400499M0QZD8 3231 aa16.07■□□□□ 0.16
TRIM28-215ENST00000601150 A0A096LPK6 155 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 EXOC1LA0A1B0GW35 172 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 FEZF1A0PJY2 475 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 P2RX6O15547 441 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 RIPK2O43353 540 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 KLF7O75840 302 aaPredicted RBP16.06■□□□□ 0.16
TRIM28-215ENST00000601150 KRT38O76015 456 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 WDR47O94967 919 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 MED26O95402 600 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 ALDOAP04075 364 aaKnown RBP16.06■□□□□ 0.16
TRIM28-215ENST00000601150 GGT5P36269 586 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 BCL6P41182 706 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 OR1D4P47884 311 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 SLC6A12P48065 614 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 IRF9Q00978 393 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 FAM83EQ2M2I3 478 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 C18orf21Q32NC0 220 aaPredicted RBP16.06■□□□□ 0.16
TRIM28-215ENST00000601150 CATSPEREQ5SY80 951 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 MRPL14Q6P1L8 145 aaKnown RBP16.06■□□□□ 0.16
TRIM28-215ENST00000601150 OVCH1Q7RTY7 1134 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 VN1R4Q7Z5H5 301 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 ISCA2Q86U28 154 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 GSPT2Q8IYD1 628 aaKnown RBP16.06■□□□□ 0.16
TRIM28-215ENST00000601150 CENPLQ8N0S6 344 aaPredicted RBP16.06■□□□□ 0.16
TRIM28-215ENST00000601150 METTL27Q8N6F8 245 aaPredicted RBP16.06■□□□□ 0.16
TRIM28-215ENST00000601150 PDPRQ8NCN5 879 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 DCAKDQ8WVC6 231 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 KCTD4Q8WVF5 259 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.06■□□□□ 0.16
TRIM28-215ENST00000601150 APOBEC4Q8WW27 367 aaKnown RBP16.06■□□□□ 0.16
TRIM28-215ENST00000601150 THAP4Q8WY91 577 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 EXT2Q93063 718 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 NXNL1Q96CM4 212 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 MVB12AQ96EY5 273 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 PELI2Q9HAT8 420 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 ZNF304Q9HCX3 659 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 NUDT4Q9NZJ9 180 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 CDC14AQ9UNH5 594 aa16.06■□□□□ 0.16
TRIM28-215ENST00000601150 PTRH2Q9Y3E5 179 aaKnown RBP16.06■□□□□ 0.16
TRIM28-215ENST00000601150 CACNA1GO43497 2377 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 TRBC2A0A5B9 178 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 CCDC189A1A4V9 331 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 EIF4E1BA6NMX2 242 aaKnown RBP16.05■□□□□ 0.16
TRIM28-215ENST00000601150 ESPNB1AK53 854 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 TAPBPO15533 448 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 LCMT2O60294 686 aaKnown RBP16.05■□□□□ 0.16
TRIM28-215ENST00000601150 KERAO60938 352 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 IPO13O94829 963 aaKnown RBP16.05■□□□□ 0.16
TRIM28-215ENST00000601150 ALBP02768 609 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 FAM87AP0C7U9 286 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 TNFRSF8P28908 595 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 FOLR3P41439 243 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 GDF5P43026 501 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 MEF2AQ02078 507 aaPredicted RBP16.05■□□□□ 0.16
TRIM28-215ENST00000601150 LY6DQ14210 128 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 NDUFA9Q16795 377 aa16.05■□□□□ 0.16
TRIM28-215ENST00000601150 FAM69BQ5VUD6 431 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms