RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ZNF425Q6IV72 752 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 TMEM205Q6UW68 189 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 PLD3Q8IV08 490 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 ZC3H7AQ8IWR0 971 aaKnown RBP10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 MCOLN3Q8TDD5 553 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 CCDC120Q96HB5 630 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 TCF12Q99081 682 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 TSGA10Q9BZW7 698 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 RBSNQ9H1K0 784 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 SYNPO2LQ9H987 977 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 ABI3Q9P2A4 366 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 TEKT2Q9UIF3 430 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 SOX13Q9UN79 622 aa10.01□□□□□ -0.81
CHMP2A-202ENST00000596708 IGHV3-20A0A0C4DH32 117 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 A0A1W2PQ72 361 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 CTAGE9A4FU28 777 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 E7ENX8 843 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 H7BY64 318 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 SMAPO00193 183 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 HAT1O14929 419 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 P2RX6O15547 441 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 ZBTB14O43829 449 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 SEC24DO94855 1032 aaPredicted RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 SLC16A8O95907 504 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 STATHP02808 62 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 ESRRAP11474 423 aaPredicted RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 EZRP15311 586 aaKnown RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 PAMP19021 973 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 OGNP20774 298 aaKnown RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 HTR1EP28566 365 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 CA7P43166 264 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 KCNJ1P48048 391 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 ADARP55265 1226 aaKnown RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 ABATP80404 500 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 SARNPP82979 210 aaKnown RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 PMP22Q01453 160 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 TAP2Q03519 686 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 FAM53BQ14153 422 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 SIX1Q15475 284 aaPredicted RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 BTBD16Q32M84 506 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 TTLL9Q3SXZ7 439 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 MINDY4Q4G0A6 757 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 ZNF766Q5HY98 468 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 MTFR2Q6P444 385 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 CASC4Q6P4E1 433 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 NEK10Q6ZWH5 1172 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 CPEB2Q7Z5Q1 589 aaKnown RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 REXO1L1PQ8IX06 675 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 ZNF808Q8N4W9 903 aaPredicted RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 SPC24Q8NBT2 197 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 OR9A4Q8NGU2 314 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 ZNF480Q8WV37 535 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 MAIP1Q8WWC4 291 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 IMMP1LQ96LU5 166 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 ZNF354BQ96LW1 612 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 PRAP1Q96NZ9 151 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 EBNA1BP2Q99848 306 aaKnown RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 RNF32Q9H0A6 362 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 CCDC68Q9H2F9 335 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 KCNK13Q9HB14 408 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 CHST11Q9NPF2 352 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 C19orf25Q9UFG5 118 aaPredicted RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 VPS9D1Q9Y2B5 631 aa10□□□□□ -0.81
CHMP2A-202ENST00000596708 KLF2Q9Y5W3 355 aaPredicted RBP10□□□□□ -0.81
CHMP2A-202ENST00000596708 DNAJC13O75165 2243 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 TCRBV7S3A2A0A539 114 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 FAM227AF5H4B4 570 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 H0YIG0 161 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 TTI1O43156 1089 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 F7P08709 466 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 MPC1LP0DKB6 136 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 COX6B1P14854 86 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 TPSB2P20231 275 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 POU3F2P20265 443 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 CDK16Q00536 496 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 RELAQ04206 551 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 CUL1Q13616 776 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 THOC5Q13769 683 aaKnown RBP9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 DHX34Q14147 1143 aaKnown RBP9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 TRIP13Q15645 432 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 TPSAB1Q15661 275 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 KCTD19Q17RG1 926 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 ZXDCQ2QGD7 858 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.99□□□□□ -0.811e-7■■□□□ 13.1
CHMP2A-202ENST00000596708 MEI1Q5TIA1 1274 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 FCRLBQ6BAA4 426 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 KIAA0930Q6ICG6 404 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 NEPROQ6NW34 567 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 DRICH1Q6PGQ1 229 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 RPTNQ6XPR3 784 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 BNC2Q6ZN30 1099 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 LANCL3Q6ZV70 420 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 CENPUQ71F23 418 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 GDF7Q7Z4P5 450 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 CILP2Q8IUL8 1156 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 PRELID2Q8N945 189 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 OR51Q1Q8NH59 317 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 CYTH2Q99418 400 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 SLC30A3Q99726 388 aa9.99□□□□□ -0.81
CHMP2A-202ENST00000596708 VN1R1Q9GZP7 353 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms