RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 VPS41P49754 854 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 TERF1P54274 439 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 GPS1Q13098 491 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 NDUFA9Q16795 377 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 SYT16Q17RD7 645 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 ANKRD22Q5VYY1 191 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 ADCK2Q7Z695 626 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 LRRC56Q8IYG6 542 aaPredicted RBP22.68■■□□□ 1.22
LSM4-202ENST00000593564 ZNF669Q96BR6 464 aaPredicted RBP22.68■■□□□ 1.22
LSM4-202ENST00000593564 RNF32Q9H0A6 362 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 MKL2Q9ULH7 1088 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 ENTPD4Q9Y227 616 aa22.68■■□□□ 1.22
LSM4-202ENST00000593564 CTAGE9A4FU28 777 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 SYF2O95926 243 aaKnown RBP22.67■■□□□ 1.22
LSM4-202ENST00000593564 UQCRHP07919 91 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 ITGAMP11215 1152 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 MLNP12872 115 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 SKIV2L2P42285 1042 aaKnown RBP22.67■■□□□ 1.22
LSM4-202ENST00000593564 CUL1Q13616 776 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 THOC5Q13769 683 aaKnown RBP22.67■■□□□ 1.22
LSM4-202ENST00000593564 ZNF549Q6P9A3 640 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 FJX1Q86VR8 437 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 PLD3Q8IV08 490 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 TRIM58Q8NG06 486 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 RELTQ969Z4 430 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 TUBB6Q9BUF5 446 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.67■■□□□ 1.22
LSM4-202ENST00000593564 CCDC68Q9H2F9 335 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 DHRS7Q9Y394 339 aa22.67■■□□□ 1.22
LSM4-202ENST00000593564 ZCWPW2A0A1B0GU75 182 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 SDR42E2A6NKP2 422 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 ZBTB14O43829 449 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 WDPCPO95876 746 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 CYC1P08574 325 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 CCDC175P0C221 793 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 CXCR5P32302 372 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 AVPR1BP47901 424 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 EFNA3P52797 238 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 KCNK10P57789 538 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 MAT1AQ00266 395 aaKnown RBP22.66■■□□□ 1.22
LSM4-202ENST00000593564 THEMIS2Q5TEJ8 643 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 HIBCHQ6NVY1 386 aaPredicted RBP22.66■■□□□ 1.22
LSM4-202ENST00000593564 CYHR1Q6ZMK1 362 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 DENND6AQ8IWF6 608 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 MCUQ8NE86 351 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 IMMP1LQ96LU5 166 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 XAB2Q9HCS7 855 aaKnown RBP22.66■■□□□ 1.22
LSM4-202ENST00000593564 FBXO6Q9NRD1 293 aaPredicted RBP22.66■■□□□ 1.22
LSM4-202ENST00000593564 ABCF3Q9NUQ8 709 aa22.66■■□□□ 1.22
LSM4-202ENST00000593564 H0YIG0 161 aa22.65■■□□□ 1.22
LSM4-202ENST00000593564 H7BY64 318 aa22.65■■□□□ 1.22
LSM4-202ENST00000593564 HNRNPRO43390 633 aaKnown RBP22.65■■□□□ 1.22
LSM4-202ENST00000593564 F7P08709 466 aaPredicted RBP22.65■■□□□ 1.22
LSM4-202ENST00000593564 C8orf89P0DMQ9 161 aa22.65■■□□□ 1.22
LSM4-202ENST00000593564 HRH2P25021 359 aa22.65■■□□□ 1.22
LSM4-202ENST00000593564 IMPA1P29218 277 aa22.65■■□□□ 1.22
LSM4-202ENST00000593564 SNRPNP63162 240 aaKnown RBP22.65■■□□□ 1.22
LSM4-202ENST00000593564 CTBP1Q13363 440 aa22.65■■□□□ 1.22
LSM4-202ENST00000593564 PRAP1Q96NZ9 151 aa22.65■■□□□ 1.22
LSM4-202ENST00000593564 TMEM184CQ9NVA4 438 aa22.65■■□□□ 1.22
LSM4-202ENST00000593564 COMMD10Q9Y6G5 202 aa22.65■■□□□ 1.22
LSM4-202ENST00000593564 KIF5CO60282 957 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 F10P00742 488 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 KRT14P02533 472 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 SLC1A2P43004 574 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 ABHD17BQ5VST6 288 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 TTC27Q6P3X3 843 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 VN1R4Q7Z5H5 301 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 SPNS2Q8IVW8 549 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 LMNTD2Q8IXW0 634 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 OR9A4Q8NGU2 314 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 DNAJB8Q8NHS0 232 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 CD200R1Q8TD46 325 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 METTL21AQ8WXB1 218 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 SERPINB12Q96P63 405 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 GPR21Q99679 349 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 VN1R1Q9GZP7 353 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 ABI3Q9P2A4 366 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 CPAMD8Q8IZJ3 1885 aa22.64■■□□□ 1.21
LSM4-202ENST00000593564 KCNE1BA0A087WTH5 132 aa22.63■■□□□ 1.21
LSM4-202ENST00000593564 EIF3FO00303 357 aaPredicted RBP22.63■■□□□ 1.21
LSM4-202ENST00000593564 NSA2O95478 260 aaKnown RBP22.63■■□□□ 1.21
LSM4-202ENST00000593564 CRYABP02511 175 aaKnown RBP22.63■■□□□ 1.21
LSM4-202ENST00000593564 MYBL2P10244 700 aa22.63■■□□□ 1.21
LSM4-202ENST00000593564 RPS15AP62244 130 aaKnown RBP22.63■■□□□ 1.21
LSM4-202ENST00000593564 GFRALQ6UXV0 394 aa22.63■■□□□ 1.21
LSM4-202ENST00000593564 UBE2R2Q712K3 238 aaPredicted RBP22.63■■□□□ 1.21
LSM4-202ENST00000593564 PIWIL4Q7Z3Z4 852 aaKnown RBP22.63■■□□□ 1.21
LSM4-202ENST00000593564 MARVELD3Q96A59 401 aa22.63■■□□□ 1.21
LSM4-202ENST00000593564 CCDC177Q9NQR7 707 aaPredicted RBP22.63■■□□□ 1.21
LSM4-202ENST00000593564 TEKT2Q9UIF3 430 aa22.63■■□□□ 1.21
LSM4-202ENST00000593564 CSMD1Q96PZ7 3565 aa22.63■■□□□ 1.21
LSM4-202ENST00000593564 OR5H15A6NDH6 313 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 PRAMEF2O60811 474 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 RASAL1O95294 804 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 STATHP02808 62 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 TNFRSF8P28908 595 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 LONRF1Q17RB8 773 aa22.62■■□□□ 1.21
LSM4-202ENST00000593564 CPEB2Q7Z5Q1 589 aaKnown RBP22.62■■□□□ 1.21
LSM4-202ENST00000593564 CPNE9Q8IYJ1 553 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms