RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 RUNDC3BQ96NL0 473 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 OR2A5Q96R48 311 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 NDNQ99608 321 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 SOX17Q9H6I2 414 aaPredicted RBP12.57□□□□□ -0.4
H3F3B-213ENST00000593254 ZNF552Q9H707 407 aaPredicted RBP12.57□□□□□ -0.4
H3F3B-213ENST00000593254 ZNF304Q9HCX3 659 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 ATP13A2Q9NQ11 1180 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 SEMA3GQ9NS98 782 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 UTP6Q9NYH9 597 aaKnown RBP12.57□□□□□ -0.4
H3F3B-213ENST00000593254 TAS2R13Q9NYV9 303 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 TRMT6Q9UJA5 497 aaKnown RBP12.57□□□□□ -0.4
H3F3B-213ENST00000593254 CDC23Q9UJX2 597 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 RUVBL1Q9Y265 456 aaKnown RBP12.57□□□□□ -0.4
H3F3B-213ENST00000593254 B3GNT3Q9Y2A9 372 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 SCN3AQ9NY46 2000 aa12.57□□□□□ -0.4
H3F3B-213ENST00000593254 NIPBLQ6KC79 2804 aaeCLIP12.57□□□□□ -0.4
H3F3B-213ENST00000593254 NAV3Q8IVL0 2385 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 IGLV3-12A0A075B6K2 115 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 ARHGAP10A1A4S6 786 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 KLHL41O60662 606 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 AHSGP02765 367 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 ALPPP05187 535 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 GNG11P61952 73 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 DR1Q01658 176 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 AIMP2Q13155 320 aaKnown RBP12.56□□□□□ -0.4
H3F3B-213ENST00000593254 ELOAQ14241 798 aaKnown RBP12.56□□□□□ -0.4
H3F3B-213ENST00000593254 HKDC1Q2TB90 917 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 RBM20Q5T481 1227 aaKnown RBP12.56□□□□□ -0.4
H3F3B-213ENST00000593254 KIRREL2Q6UWL6 708 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 IGFL3Q6UXB1 125 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 SHISA6Q6ZSJ9 500 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 KLHL7Q8IXQ5 586 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 PDIK1LQ8N165 341 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 ARHGEF39Q8N4T4 335 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 CSNK1A1LQ8N752 337 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 STT3BQ8TCJ2 826 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 EEF1AKMT1Q8WVE0 214 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 MVB12AQ96EY5 273 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 NAPGQ99747 312 aaPredicted RBP12.56□□□□□ -0.4
H3F3B-213ENST00000593254 WDR83Q9BRX9 315 aaKnown RBP12.56□□□□□ -0.4
H3F3B-213ENST00000593254 STOX2Q9P2F5 926 aaPredicted RBP12.56□□□□□ -0.4
H3F3B-213ENST00000593254 ZNF282Q9UDV7 671 aaPredicted RBP12.56□□□□□ -0.4
H3F3B-213ENST00000593254 FBXL4Q9UKA2 621 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 ADAMTS6Q9UKP5 1117 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 SAR1BQ9Y6B6 198 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 MYO7BQ6PIF6 2116 aa12.56□□□□□ -0.4
H3F3B-213ENST00000593254 HAT1O14929 419 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 IPO13O94829 963 aaKnown RBP12.55□□□□□ -0.4
H3F3B-213ENST00000593254 C8GP07360 202 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 ZGLP1P0C6A0 271 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 FBLP22087 321 aaKnown RBP12.55□□□□□ -0.4
H3F3B-213ENST00000593254 ELK3P41970 407 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 CARSP49589 748 aaKnown RBP12.55□□□□□ -0.4
H3F3B-213ENST00000593254 RGS4P49798 205 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 CDKN2DP55273 166 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 TBPL1P62380 186 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 OCA2Q04671 838 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 KLC1Q07866 573 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 SP140Q13342 867 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 NAA30Q147X3 362 aaPredicted RBP12.55□□□□□ -0.4
H3F3B-213ENST00000593254 ZRSR2Q15696 482 aaKnown RBP12.55□□□□□ -0.4
H3F3B-213ENST00000593254 RBBP7Q16576 425 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 KRTAP21-3Q3LHN1 58 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 TEDDM1Q5T9Z0 273 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 THEMIS2Q5TEJ8 643 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 GARNL3Q5VVW2 1013 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 PRAMEF13Q5VWM6 474 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 STEAP4Q687X5 459 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 SP5Q6BEB4 398 aaPredicted RBP12.55□□□□□ -0.4
H3F3B-213ENST00000593254 HIBCHQ6NVY1 386 aaPredicted RBP12.55□□□□□ -0.4
H3F3B-213ENST00000593254 PAQR3Q6TCH7 311 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 MCEMP1Q8IX19 187 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 ST6GALNAC3Q8NDV1 305 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 OR11G2Q8NGC1 345 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 MCOLN3Q8TDD5 553 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 RERGQ96A58 199 aaPredicted RBP12.55□□□□□ -0.4
H3F3B-213ENST00000593254 MIEF2Q96C03 454 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 LRRC39Q96DD0 335 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 CABS1Q96KC9 395 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 CCDC138Q96M89 665 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 PWWP2AQ96N64 755 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 CRB3Q9BUF7 120 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 CCDC177Q9NQR7 707 aaPredicted RBP12.55□□□□□ -0.4
H3F3B-213ENST00000593254 ABCF3Q9NUQ8 709 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 SLC17A6Q9P2U8 582 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 CDC14AQ9UNH5 594 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 CHMP2BQ9UQN3 213 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 PDE10AQ9Y233 779 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 NTNG1Q9Y2I2 539 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 TEX264Q9Y6I9 313 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 SCN2AQ99250 2005 aa12.55□□□□□ -0.4
H3F3B-213ENST00000593254 PCNX1Q96RV3 2341 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 H7BY64 318 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 CCDC188H7C350 402 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 TXNDC9O14530 226 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 FANCGO15287 622 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 TP73O15350 636 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 SLC16A5O15375 505 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 P2RX6O15547 441 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 ALOX12BO75342 701 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms