RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 HEMK1Q9Y5R4 338 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-227ENST00000591849 A0A087X1B8 175 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 IGKV1-8A0A0C4DH67 115 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 FEZF1A0PJY2 475 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 FITM1A5D6W6 292 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 ARGFXA6NJG6 315 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 SUPT3HB4E1H0 165 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 H3BMH7 237 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 MKRN2OSH3BPM6 223 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 CLGNO14967 610 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 OR1F1O43749 312 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 SUPT3HO75486 399 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 KRT38O76015 456 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 WDR47O94967 919 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 STATHP02808 62 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 CD1DP15813 335 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 TFEBP19484 476 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 ITGAXP20702 1163 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 AVPR1BP47901 424 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 SERPINB8P50452 374 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 SERPINB9P50453 376 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 CCL11P51671 97 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 CSNK1G2P78368 415 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 CDKL1Q00532 357 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 NFKB2Q00653 900 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 KCNAB2Q13303 367 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 BMPR2Q13873 1038 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 SSPNQ14714 243 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 RBBP5Q15291 538 aaKnown RBP9.61□□□□□ -0.87
BRCA1-227ENST00000591849 FAM83EQ2M2I3 478 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 PRTGQ2VWP7 1150 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 FAM69BQ5VUD6 431 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 GARNL3Q5VVW2 1013 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 SULT1C3Q6IMI6 304 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 OVCH1Q7RTY7 1134 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 CMC1Q7Z7K0 106 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 ASPGQ86U10 573 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 PRSS58Q8IYP2 241 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 TCAIMQ8N3R3 496 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 EXD3Q8N9H8 876 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-227ENST00000591849 SLC13A3Q8WWT9 602 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 SLC5A11Q8WWX8 675 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 PTERQ96BW5 349 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 MMABQ96EY8 250 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-227ENST00000591849 VPS50Q96JG6 964 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 ZNF285Q96NJ3 590 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 IP6K3Q96PC2 410 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 OR2A5Q96R48 311 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 AIF1LQ9BQI0 150 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 CCDC77Q9BR77 488 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 MCMBPQ9BTE3 642 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 CAPS2Q9BXY5 557 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 VPS11Q9H270 941 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 ADNPQ9H2P0 1102 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 ALG9Q9H6U8 611 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 GEMIN8Q9NWZ8 242 aaKnown RBP9.61□□□□□ -0.87
BRCA1-227ENST00000591849 NXT1Q9UKK6 140 aaKnown RBP9.61□□□□□ -0.87
BRCA1-227ENST00000591849 RUVBL1Q9Y265 456 aaKnown RBP9.61□□□□□ -0.87
BRCA1-227ENST00000591849 SLC22A14Q9Y267 594 aa9.61□□□□□ -0.87
BRCA1-227ENST00000591849 MYO18BQ8IUG5 2567 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 SPTA1P02549 2419 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 A0A096LPK6 155 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 EXOC1LA0A1B0GW35 172 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 SYCE1LA8MT33 242 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 RFPL1O75677 317 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 STK16O75716 305 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 C1QL1O75973 258 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 IGHEP01854 428 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 ALBP02768 609 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 PRB1P04280 392 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 C2P06681 752 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 CAPN1P07384 714 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 FURINP09958 794 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 SLC35G6P0C7Q6 338 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 CXCR2P25025 360 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 GDF5P43026 501 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 PMS2P54278 862 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 EMP3P54852 163 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 RRADP55042 308 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 MEF2AQ02078 507 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-227ENST00000591849 RGS1Q08116 209 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 IL10RAQ13651 578 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 TGFBIQ15582 683 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 ZKSCAN8Q15776 578 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-227ENST00000591849 PPP1R3AQ16821 1122 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 HKDC1Q2TB90 917 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 CDKL4Q5MAI5 379 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 CATSPEREQ5SY80 951 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 ZNF385CQ66K41 422 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-227ENST00000591849 NXPE4Q6UWF7 544 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 TRMT10CQ7L0Y3 403 aaKnown RBP9.6□□□□□ -0.87
BRCA1-227ENST00000591849 TMPRSS11BQ86T26 416 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 MFSD9Q8NBP5 474 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 OR2Y1Q8NGV0 311 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 C9orf43Q8TAL5 461 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-227ENST00000591849 KCTD4Q8WVF5 259 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 KIAA1191Q96A73 305 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 FKBP10Q96AY3 582 aa9.6□□□□□ -0.87
BRCA1-227ENST00000591849 MIEF2Q96C03 454 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms