RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ZNF480Q8WV37 535 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 HDAC2Q92769 488 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 ARRDC3Q96B67 414 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 CNDP2Q96KP4 475 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 LINC00615Q96LM1 132 aaPredicted RBP18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 BAG5Q9UL15 447 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 GPR34Q9UPC5 381 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 FOXE1O00358 373 aaPredicted RBP18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 LILRB5O75023 590 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 KCNK5O95279 499 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 ZNF682O95780 498 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 SOD1P00441 154 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 TIA1P31483 386 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 IL18R1Q13478 541 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 LAPTM5Q13571 262 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 VEZF1Q14119 521 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 TMEM52BQ4KMG9 183 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 SHQ1Q6PI26 577 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 TMEM26Q6ZUK4 368 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 ARL10Q8N8L6 244 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 SNX19Q92543 992 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 FOXJ1Q92949 421 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 NXPE3Q969Y0 559 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 COQ8BQ96D53 544 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 TMEM106CQ9BVX2 250 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 ASPSCR1Q9BZE9 553 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 EHD1Q9H4M9 534 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 POLR1BQ9H9Y6 1135 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 TM9SF3Q9HD45 589 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 WBP1LQ9NX94 342 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 SIRT5Q9NXA8 310 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 UTS2RQ9UKP6 389 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 BLOC1S6Q9UL45 172 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 COQ6Q9Y2Z9 468 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 GMEB1Q9Y692 573 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 PRRT4C9JH25 899 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 SPINT1O43278 529 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 VEGFDO43915 354 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 HS6ST1O60243 411 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 B3GALT4O96024 378 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 C1GALT1C1LP0DN25 315 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 LAMP1P11279 417 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 C6P13671 934 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 ADRB3P13945 408 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 EEF1B2P24534 225 aaKnown RBP18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 KDELR2P33947 212 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 RPS6KA3P51812 740 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 IST1P53990 364 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 NUP107P57740 925 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 RAE1P78406 368 aaKnown RBP18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 SPIDRQ14159 915 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 LRRC23Q53EV4 343 aaPredicted RBP18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 BROXQ5VW32 411 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 GALNT18Q6P9A2 607 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 KCTD8Q6ZWB6 473 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 TMPRSS11BQ86T26 416 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 NEIL2Q969S2 332 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 MBOAT4Q96T53 435 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 SGPP1Q9BX95 441 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 DPEP2Q9H4A9 486 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 CXorf21Q9HAI6 301 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 IL1RAPQ9NPH3 570 aa18.49■□□□□ 0.55
PRKCSH-209ENST00000589838 GABRR3A8MPY1 467 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 NOBOXO60393 691 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 SHMT2P34897 504 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 RPL3P39023 403 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 VIPR2P41587 438 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 TBPL1P62380 186 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 PHEXP78562 749 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 DSG4Q86SJ6 1040 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 CPA6Q8N4T0 437 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 SETD7Q8WTS6 366 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 UBE2E3Q969T4 207 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 ISOC1Q96CN7 298 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 RSPRY1Q96DX4 576 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 NRBF2Q96F24 287 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 MTIF3Q9H2K0 278 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 TPT1P8Q9HAU6 139 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 CIDEBQ9UHD4 219 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 VPS4AQ9UN37 437 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 GNG14A0A1W2PPG7 69 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 NPPBP16860 134 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 JUNBP17275 347 aaPredicted RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 PCSK6P29122 969 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 SLC6A11P48066 632 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 RPS13P62277 151 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 SLC14A1Q13336 389 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 AP1ARQ63HQ0 302 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 OR2T5Q6IEZ7 315 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 EIF3MQ7L2H7 374 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 ZNF551Q7Z340 670 aaPredicted RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 GPR155Q7Z3F1 870 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 TRMT11Q7Z4G4 463 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 R3HCC1LQ7Z5L2 792 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 NPAS3Q8IXF0 933 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 LAS2Q8IYD9 372 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 CLECL1Q8IZS7 167 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 ZNF784Q8NCA9 323 aaPredicted RBP18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 OR2T29Q8NH02 315 aa18.48■□□□□ 0.55
PRKCSH-209ENST00000589838 SH3KBP1Q96B97 665 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms