RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CPTPQ5TA50 214 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 THEMIS2Q5TEJ8 643 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TBC1D3GQ6DHY5 549 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TBC1D3CQ6IPX1 549 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TMIGD1Q6UXZ0 262 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 FAM83HQ6ZRV2 1179 aaPredicted RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 ZBTB49Q6ZSB9 765 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 IKBIPQ70UQ0 350 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 SERPINA11Q86U17 422 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 C17orf64Q86WR6 236 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TBC1D3Q8IZP1 549 aaPredicted RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 EID3Q8N140 333 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 PGBD3Q8N328 593 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 METTL4Q8N3J2 472 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 KRTCAP2Q8N6L1 136 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 IL17RCQ8NAC3 791 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 SMRP1Q8NCR6 262 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TTLQ8NG68 377 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 SH3KBP1Q96B97 665 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 BIRC7Q96CA5 298 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 COQ8BQ96D53 544 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 FAM120BQ96EK7 910 aaKnown RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 SCARF2Q96GP6 870 aaPredicted RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 REXO5Q96IC2 774 aaKnown RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 ZNF597Q96LX8 424 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TSSK3Q96PN8 268 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 MTERF1Q99551 399 aaKnown RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 APOOQ9BUR5 198 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 BHLHE41Q9C0J9 482 aaPredicted RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 PAIP1Q9H074 479 aaKnown RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 RHBGQ9H310 441 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 MAGIXQ9H6Y5 334 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 KAT8Q9H7Z6 458 aaKnown RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 SERHLQ9NQF3 203 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 AGPAT4Q9NRZ5 378 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 OLAHQ9NV23 265 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 GEMIN8Q9NWZ8 242 aaKnown RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 ATP6V1HQ9UI12 483 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 CD207Q9UJ71 328 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 ZFR2Q9UPR6 939 aaKnown RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 AURKCQ9UQB9 309 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 PCDHB14Q9Y5E9 798 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 PIPSLA2A3N6 862 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 A6NHS1 94 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 SCAMP2O15127 329 aaKnown RBP10.01□□□□□ -0.81
VPS25-203ENST00000589520 DFNA5O60443 496 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 DEAF1O75398 565 aaPredicted RBP10.01□□□□□ -0.81
VPS25-203ENST00000589520 EPN2O95208 641 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 KLF8O95600 359 aaPredicted RBP10.01□□□□□ -0.81
VPS25-203ENST00000589520 APBB3O95704 486 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 LDLRP01130 860 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 LYNP07948 512 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 TACR1P25103 407 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 LTBRP36941 435 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 SOX9P48436 509 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 CCR8P51685 355 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 ARFIP1P53367 373 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 ADPRHP54922 357 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 SEC13P55735 322 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 RPS13P62277 151 aaKnown RBP10.01□□□□□ -0.81
VPS25-203ENST00000589520 ABATP80404 500 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 PRKCQQ04759 706 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 DLX2Q07687 328 aaPredicted RBP10.01□□□□□ -0.81
VPS25-203ENST00000589520 MYBPC3Q14896 1274 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 ATP6AP1Q15904 470 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 AAK1Q2M2I8 961 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 TMEM154Q6P9G4 183 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 DOK6Q6PKX4 331 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 WASH2PQ6VEQ5 465 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 PAGE2Q7Z2X7 111 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 TRIM69Q86WT6 500 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 CALHM3Q86XJ0 350 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 FAM129CQ86XR2 697 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 MICU2Q8IYU8 434 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 TBC1D19Q8N5T2 526 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 MFSD2AQ8NA29 543 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 ST13P5Q8NFI4 369 aaPredicted RBP10.01□□□□□ -0.81
VPS25-203ENST00000589520 ABHD11Q8NFV4 315 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 OR10A6Q8NH74 314 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 CENPKQ9BS16 269 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 DUSP26Q9BV47 211 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 LGR4Q9BXB1 951 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 MKRN2Q9H000 416 aaKnown RBP10.01□□□□□ -0.81
VPS25-203ENST00000589520 BTBD1Q9H0C5 482 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 RAD21L1Q9H4I0 556 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 RPF2Q9H7B2 306 aaKnown RBP10.01□□□□□ -0.81
VPS25-203ENST00000589520 COQ10BQ9H8M1 238 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 PRM3Q9NNZ6 103 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 WASH6PQ9NQA3 447 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 DMRT3Q9NQL9 472 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 MBNL1Q9NR56 388 aaKnown RBP10.01□□□□□ -0.81
VPS25-203ENST00000589520 ZNF282Q9UDV7 671 aaPredicted RBP10.01□□□□□ -0.81
VPS25-203ENST00000589520 SLC23A2Q9UGH3 650 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 PCDHGB4Q9UN71 923 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 COLEC10Q9Y6Z7 277 aa10.01□□□□□ -0.81
VPS25-203ENST00000589520 GNG14A0A1W2PPG7 69 aa10□□□□□ -0.81
VPS25-203ENST00000589520 A0A1W2PQF6 199 aa10□□□□□ -0.81
VPS25-203ENST00000589520 ANKDD1BA6NHY2 528 aa10□□□□□ -0.81
VPS25-203ENST00000589520 LRRC72A6NJI9 287 aa10□□□□□ -0.81
VPS25-203ENST00000589520 CXCR6O00574 342 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms