RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 EEF1A2Q05639 463 aaKnown RBP10.05□□□□□ -0.8
RFFL-209ENST00000581265 ART3Q13508 389 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 PCOLCEQ15113 449 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 ZC3H7AQ8IWR0 971 aaKnown RBP10.05□□□□□ -0.8
RFFL-209ENST00000581265 LRRC56Q8IYG6 542 aaPredicted RBP10.05□□□□□ -0.8
RFFL-209ENST00000581265 DNAJB8Q8NHS0 232 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 MAIP1Q8WWC4 291 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 RERGQ96A58 199 aaPredicted RBP10.05□□□□□ -0.8
RFFL-209ENST00000581265 MAGEB10Q96LZ2 347 aaPredicted RBP10.05□□□□□ -0.8
RFFL-209ENST00000581265 EBNA1BP2Q99848 306 aaKnown RBP10.05□□□□□ -0.8
RFFL-209ENST00000581265 TUBB6Q9BUF5 446 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.05□□□□□ -0.87e-7■□□□□ 9.5
RFFL-209ENST00000581265 HOMER3Q9NSC5 361 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 INTS10Q9NVR2 710 aaKnown RBP10.05□□□□□ -0.8
RFFL-209ENST00000581265 STMN3Q9NZ72 180 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 ABI3Q9P2A4 366 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 COPG2Q9UBF2 871 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 TSR3Q9UJK0 312 aaKnown RBP10.05□□□□□ -0.8
RFFL-209ENST00000581265 MKL2Q9ULH7 1088 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 MED16Q9Y2X0 877 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 KLF2Q9Y5W3 355 aaPredicted RBP10.05□□□□□ -0.8
RFFL-209ENST00000581265 PCNX1Q96RV3 2341 aa10.05□□□□□ -0.8
RFFL-209ENST00000581265 APCP25054 2843 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.04□□□□□ -0.8
RFFL-209ENST00000581265 KCNE1BA0A087WTH5 132 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 FAM237BA0A1B0GVD1 139 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 E5RI56 91 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 H0YIG0 161 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 SMAPO00193 183 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 ZBTB14O43829 449 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 AVILO75366 819 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 RASAL1O95294 804 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 CRYABP02511 175 aaKnown RBP10.04□□□□□ -0.8
RFFL-209ENST00000581265 FGGP02679 453 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 CELA2AP08217 269 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 CYC1P08574 325 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 SNRPB2P08579 225 aaKnown RBP10.04□□□□□ -0.8
RFFL-209ENST00000581265 ITGAMP11215 1152 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 PAMP19021 973 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 HRH2P25021 359 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 CDC25BP30305 580 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 SKIV2L2P42285 1042 aaKnown RBP10.04□□□□□ -0.8
RFFL-209ENST00000581265 EFNA3P52797 238 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 SARNPP82979 210 aaKnown RBP10.04□□□□□ -0.8
RFFL-209ENST00000581265 TSTA3Q13630 321 aaPredicted RBP10.04□□□□□ -0.8
RFFL-209ENST00000581265 KCNJ11Q14654 390 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 NDUFA9Q16795 377 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 SYT16Q17RD7 645 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.04□□□□□ -0.8
RFFL-209ENST00000581265 TTLL9Q3SXZ7 439 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 ABHD17BQ5VST6 288 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 FAAH2Q6GMR7 532 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 TMEM207Q6UWW9 146 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 GFRALQ6UXV0 394 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 CYHR1Q6ZMK1 362 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 CAND1Q86VP6 1230 aaKnown RBP10.04□□□□□ -0.8
RFFL-209ENST00000581265 GAS2L3Q86XJ1 694 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 PRELID2Q8N945 189 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 KCNJ9Q92806 393 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 CYTH2Q99418 400 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 SLC30A3Q99726 388 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 TMEM184CQ9NVA4 438 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 PCYOX1Q9UHG3 505 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 TEKT2Q9UIF3 430 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 PKDREJQ9NTG1 2253 aa10.04□□□□□ -0.8
RFFL-209ENST00000581265 OR5H15A6NDH6 313 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 SDR42E2A6NKP2 422 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 H7BY64 318 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 P2RX6O15547 441 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 PRAMEF2O60811 474 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 UNC5CO95185 931 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 F10P00742 488 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 MPC1LP0DKB6 136 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 C8orf89P0DMQ9 161 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 MLNP12872 115 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 ENO3P13929 434 aaPredicted RBP10.03□□□□□ -0.8
RFFL-209ENST00000581265 COX6B1P14854 86 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 MST1P26927 711 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 PTGER4P35408 488 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 AVPR1BP47901 424 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 SNRPNP63162 240 aaKnown RBP10.03□□□□□ -0.8
RFFL-209ENST00000581265 MAT1AQ00266 395 aaKnown RBP10.03□□□□□ -0.8
RFFL-209ENST00000581265 HIBCHQ6NVY1 386 aaPredicted RBP10.03□□□□□ -0.8
RFFL-209ENST00000581265 H3F3CQ6NXT2 135 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 MTFR2Q6P444 385 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 ZNF549Q6P9A3 640 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 ZNF662Q6ZS27 426 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 PCGF5Q86SE9 256 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 AMER2Q8N7J2 671 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 SPC24Q8NBT2 197 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 PPFIBP2Q8ND30 876 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 GIMAP7Q8NHV1 300 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 SUN3Q8TAQ9 357 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 ITLN2Q8WWU7 325 aaPredicted RBP10.03□□□□□ -0.8
RFFL-209ENST00000581265 METTL21AQ8WXB1 218 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 PRAP1Q96NZ9 151 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 VN1R1Q9GZP7 353 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 SEC14L3Q9UDX4 400 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 DHRS7Q9Y394 339 aa10.03□□□□□ -0.8
RFFL-209ENST00000581265 PCDHGB6Q9Y5F9 930 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms