RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 NAT14Q8WUY8 206 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 ASB11Q8WXH4 323 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 MOCOSQ96EN8 888 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 CCDC74BQ96LY2 380 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 ZNF382Q96SR6 550 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 CD244Q9BZW8 370 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 WDR26Q9H7D7 661 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 FGF22Q9HCT0 170 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 RIC8BQ9NVN3 520 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 SLC39A1Q9NY26 324 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 FAM8A1Q9UBU6 413 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 TAGLN3Q9UI15 199 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 PCTPQ9UKL6 214 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 IKZF3Q9UKT9 509 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 B3GALT1Q9Y5Z6 326 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 DGKBQ9Y6T7 804 aa9.83□□□□□ -0.84
SS18-210ENST00000578700 IGHV5-10-1A0A0J9YXX1 117 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 C17orf113A0A1B0GUU1 675 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 EFCAB7A8K855 629 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 ZNF891A8MT65 544 aaPredicted RBP9.82□□□□□ -0.84
SS18-210ENST00000578700 A8MU76 341 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 K7EPI3 171 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 ZNF195O14628 629 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 RAD1O60671 282 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 SLCO2B1O94956 709 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 RPN2P04844 631 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 ENO1P06733 434 aaKnown RBP9.82□□□□□ -0.84
SS18-210ENST00000578700 GM2AP17900 193 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 TSPAN8P19075 237 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 KELP23276 732 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 PTPN4P29074 926 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 PBLDP30039 288 aaPredicted RBP9.82□□□□□ -0.84
SS18-210ENST00000578700 HMOX2P30519 316 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 ADSLP30566 484 aaPredicted RBP9.82□□□□□ -0.84
SS18-210ENST00000578700 CSTF2P33240 577 aaKnown RBP eCLIP9.82□□□□□ -0.84
SS18-210ENST00000578700 CCNG1P51959 295 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 STX1BP61266 288 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 NCALDP61601 193 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 SH3BP2P78314 561 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 GTF2H2Q13888 395 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 GBX1Q14549 363 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 DEFB109BQ30KR1 87 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 SNAP47Q5SQN1 464 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 ZNF648Q5T619 568 aaPredicted RBP9.82□□□□□ -0.84
SS18-210ENST00000578700 KANK2Q63ZY3 851 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 GTF2H2CQ6P1K8 395 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 CYHR1Q6ZMK1 362 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 ADGRG6Q86SQ4 1221 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 LRRTM4Q86VH4 590 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 HEATR4Q86WZ0 1026 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 FAM26EQ8N5C1 309 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 TEX9Q8N6V9 391 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 BEND7Q8N7W2 519 aaPredicted RBP9.82□□□□□ -0.84
SS18-210ENST00000578700 C9orf43Q8TAL5 461 aaPredicted RBP9.82□□□□□ -0.84
SS18-210ENST00000578700 HM13Q8TCT9 377 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 MAGEC3Q8TD91 643 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 AGAP11Q8TF27 550 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 UBTD2Q8WUN7 234 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 C19orf60Q96EN9 201 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 PPP1R36Q96LQ0 422 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 LGR4Q9BXB1 951 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 LRMDAQ9H2I8 198 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 WDR55Q9H6Y2 383 aaPredicted RBP9.82□□□□□ -0.84
SS18-210ENST00000578700 CARS2Q9HA77 564 aaKnown RBP9.82□□□□□ -0.84
SS18-210ENST00000578700 MEAF6Q9HAF1 191 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 ARMCX1Q9P291 453 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 LNPEPQ9UIQ6 1025 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 ANAPC2Q9UJX6 822 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 PTBP2Q9UKA9 531 aaKnown RBP9.82□□□□□ -0.84
SS18-210ENST00000578700 ADAMTS6Q9UKP5 1117 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 DNMT3AQ9Y6K1 912 aaPredicted RBP9.82□□□□□ -0.84
SS18-210ENST00000578700 ICE1Q9Y2F5 2266 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 LRBAP50851 2863 aa9.82□□□□□ -0.84
SS18-210ENST00000578700 ZNF106Q9H2Y7 1883 aaKnown RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 CELSR2Q9HCU4 2923 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 TRBV23OR9-2A0A075B6M9 112 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 PRSS38A1L453 326 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 TMEM233B4DJY2 109 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 MYO1CO00159 1063 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 E2F3O00716 465 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 UBFD1O14562 309 aaKnown RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 UBDO15205 165 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 GYG2O15488 501 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 ZW10O43264 779 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 DUX1O43812 170 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 POP7O75817 140 aaKnown RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 THRAP10827 490 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 AK4P27144 223 aaPredicted RBP9.81□□□□□ -0.84
SS18-210ENST00000578700 CD1CP29017 333 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 PRDX6P30041 224 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 HSPA7P48741 367 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 AGTR2P50052 363 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 CTSCP53634 463 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 BTKQ06187 659 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 ABRQ12979 859 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 RPA4Q13156 261 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 TUBB3Q13509 450 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 RPS6KA2Q15349 733 aa9.81□□□□□ -0.84
SS18-210ENST00000578700 MAPRE2Q15555 327 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms