RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 TTC29Q8NA56 475 aaPredicted RBP8.65□□□□□ -1.03
NCBP3-204ENST00000574911 STARD8Q92502 1023 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 CLP1Q92989 425 aaKnown RBP8.65□□□□□ -1.03
NCBP3-204ENST00000574911 SH3YL1Q96HL8 342 aaPredicted RBP8.65□□□□□ -1.03
NCBP3-204ENST00000574911 CAPNS2Q96L46 248 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 DPH2Q9BQC3 489 aaPredicted RBP8.65□□□□□ -1.03
NCBP3-204ENST00000574911 BRF2Q9HAW0 419 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 PCDH12Q9NPG4 1184 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 IRAK4Q9NWZ3 460 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 BTNL2Q9UIR0 455 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 ERGIC3Q9Y282 383 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 DGKBQ9Y6T7 804 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 PIKFYVEQ9Y2I7 2098 aa8.65□□□□□ -1.03
NCBP3-204ENST00000574911 DENND4CQ5VZ89 1909 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 C1orf226A1L170 272 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 TMEM202A6NGA9 273 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 MRPS14O60783 128 aaKnown RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 MYO1DO94832 1006 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 ETHE1O95571 254 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 HNRNPCP07910 306 aaKnown RBP eCLIP8.64□□□□□ -1.032e-7■■□□□ 12.7
NCBP3-204ENST00000574911 PABPC1P11940 636 aaKnown RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 OPRL1P41146 370 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 HNF4AP41235 474 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 MAP2K4P45985 399 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 IL1RL1Q01638 556 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 CREMQ03060 361 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 KCNC4Q03721 635 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 MAD2L1BPQ15013 274 aaPredicted RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 LDLRAP1Q5SW96 308 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF648Q5T619 568 aaPredicted RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 SYT6Q5T7P8 510 aaPredicted RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 AGTRAPQ6RW13 159 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 CAMKMTQ7Z624 323 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 ATL1Q8WXF7 558 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 RORBQ92753 470 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 SH3KBP1Q96B97 665 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 TIFAQ96CG3 184 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF347Q96SE7 839 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 MTERF1Q99551 399 aaKnown RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 PITX2Q99697 317 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 APOL4Q9BPW4 351 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 DUSP26Q9BV47 211 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 ASPSCR1Q9BZE9 553 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 TPT1P8Q9HAU6 139 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 SCN3BQ9NY72 215 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 STOX2Q9P2F5 926 aaPredicted RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 NFKBIL1Q9UBC1 381 aaPredicted RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 AASSQ9UDR5 926 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 CCL26Q9Y258 94 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 TSPAN11A1L157 253 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 GABRR3A8MPY1 467 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 FADS2P1A8MWK0 482 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 C9P02748 559 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 ETV3P41162 512 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 MASP1P48740 699 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 CRYBA2P53672 197 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 DEFB103AP81534 67 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 ACSM2AQ08AH3 577 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 CCSMST1Q4G0I0 132 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 HENMT1Q5T8I9 393 aaKnown RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 KIAA1614Q5VZ46 1190 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 ACSM2BQ68CK6 577 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 PDE12Q6L8Q7 609 aaKnown RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 LILRA6Q6PI73 481 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 SLC39A5Q6ZMH5 540 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 Q6ZVL8 140 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 ADIPOR2Q86V24 386 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 IGFN1Q86VF2 1251 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 TSPYL5Q86VY4 417 aaPredicted RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 RAVER1Q8IY67 606 aaKnown RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 CHTF18Q8WVB6 975 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 VMP1Q96GC9 406 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 C7orf34Q96L11 122 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 OR4K3Q96R72 315 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 ZBP1Q9H171 429 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 SGK2Q9HBY8 427 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 SIRT5Q9NXA8 310 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 THUMPD1Q9NXG2 353 aaKnown RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 FZD4Q9ULV1 537 aa8.64□□□□□ -1.03
NCBP3-204ENST00000574911 SAMHD1Q9Y3Z3 626 aaKnown RBP8.64□□□□□ -1.03
NCBP3-204ENST00000574911 SLC5A10A0PJK1 596 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 CARNS1A5YM72 827 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 OR2AG2A6NM03 316 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 TMEM229AB2RXF0 380 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 MT-ND2P03891 347 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 ABCB1P08183 1280 aaPredicted RBP8.63□□□□□ -1.03
NCBP3-204ENST00000574911 NUDT7P0C024 238 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 OCM2P0CE71 109 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 OCMP0CE72 109 aaPredicted RBP8.63□□□□□ -1.03
NCBP3-204ENST00000574911 TIMP2P16035 220 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 IDSP22304 550 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 PCGF2P35227 344 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 ASMTP46597 345 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 KCNJ10P78508 379 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 TLE2Q04725 743 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 NAE1Q13564 534 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 DDX39BQ13838 428 aaKnown RBP8.63□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF846Q147U1 533 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 CPTPQ5TA50 214 aa8.63□□□□□ -1.03
NCBP3-204ENST00000574911 LINC00299Q6ZSB3 139 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms