RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 FEVQ99581 238 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 OR51E2Q9H255 320 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 TPT1P8Q9HAU6 139 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 QPCTLQ9NXS2 382 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 GPR83Q9NYM4 423 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 M0R129 80 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 PSMD11O00231 422 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 RFPL2O75678 378 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 HSMCR30P0CW71 290 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 PRPS1L1P21108 318 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 AOAHP28039 575 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 OR1D2P34982 312 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 CRISP3P54108 245 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 TUBA1BP68363 451 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 ELP6Q0PNE2 266 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 CDC20Q12834 499 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 CHIT1Q13231 466 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 IQCCQ4KMZ1 466 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 METTL2BQ6P1Q9 378 aaKnown RBP16.89■□□□□ 0.29
SCARF1-205ENST00000571272 TUBA1AQ71U36 451 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 ZSWIM9Q86XI8 627 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 LACC1Q8IV20 430 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 SPPL2AQ8TCT8 520 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 C7orf34Q96L11 122 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 RAD18Q9NS91 495 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 TRPM5Q9NZQ8 1165 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 FAM8A1Q9UBU6 413 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 ARHGEF15O94989 841 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 OPN1SWP03999 348 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 STSP08842 583 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 HIST1H2AGP0C0S8 130 aaPredicted RBP16.89■□□□□ 0.29
SCARF1-205ENST00000571272 HIST1H2ADP20671 130 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 NSG1P42857 185 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 NR4A2P43354 598 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 AP1S1P61966 158 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 MTAPQ13126 283 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 BOP1Q14137 746 aaKnown RBP16.89■□□□□ 0.29
SCARF1-205ENST00000571272 CDKN3Q16667 212 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 DESI1Q6ICB0 168 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 FAM124AQ86V42 546 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 CLIP4Q8N3C7 705 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 GGHQ92820 318 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 HIST1H2AHQ96KK5 128 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 HIST1H2AJQ99878 128 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 H2AFJQ9BTM1 129 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 CDADC1Q9BWV3 514 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 EHD1Q9H4M9 534 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 PSORS1C1Q9UIG5 152 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 FZD4Q9ULV1 537 aa16.89■□□□□ 0.29
SCARF1-205ENST00000571272 ISPDA4D126 451 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 TLL1O43897 1013 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 KCNJ10P78508 379 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 B4GALNT1Q00973 533 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 PLD1Q13393 1074 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 ERICH5Q6P6B1 374 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 LRRC70Q7Z2Q7 622 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 PARP16Q8N5Y8 322 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 PSD4Q8NDX1 1056 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 Q96MT0 163 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 HHIPQ96QV1 700 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 CHCHD6Q9BRQ6 235 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 RLIMQ9NVW2 624 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 OR51B4Q9Y5P0 310 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 NPIPB15A6NHN6 443 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-205ENST00000571272 SUV39H1O43463 412 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 MRPS14O60783 128 aaKnown RBP16.88■□□□□ 0.29
SCARF1-205ENST00000571272 HMGA1P17096 107 aaKnown RBP16.88■□□□□ 0.29
SCARF1-205ENST00000571272 TAF12Q16514 161 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 ZNF181Q2M3W8 571 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 ATP13A5Q4VNC0 1218 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 TPGS1Q6ZTW0 290 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 PGBD3Q8N328 593 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 AMER2Q8N7J2 671 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 ZNF513Q8N8E2 541 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-205ENST00000571272 ZNF675Q8TD23 568 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 P2RY13Q9BPV8 354 aa16.88■□□□□ 0.29
SCARF1-205ENST00000571272 S100A5P33763 92 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 SMAD3P84022 425 aaKnown RBP16.87■□□□□ 0.29
SCARF1-205ENST00000571272 LYPLAL1Q5VWZ2 237 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 ANGPTL8Q6UXH0 198 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 USP43Q70EL4 1123 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 CSGALNACT1Q8TDX6 532 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 UTP15Q8TED0 518 aaKnown RBP16.87■□□□□ 0.29
SCARF1-205ENST00000571272 BCL7CQ8WUZ0 217 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-205ENST00000571272 COPS8Q99627 209 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 CENPOQ9BU64 300 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 PDE4DIPQ5VU43 2346 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 TAF4O00268 1085 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 GFRA2O00451 464 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 ABCB1P08183 1280 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-205ENST00000571272 UGT2B10P36537 528 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 OR1E2P47887 323 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 FLT3LGP49771 235 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 ZNF157P51786 506 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-205ENST00000571272 SRSF11Q05519 484 aaKnown RBP16.87■□□□□ 0.29
SCARF1-205ENST00000571272 LRIT3Q3SXY7 679 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 GPR33Q49SQ1 333 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 GGTA1PQ4G0N0 100 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 LRRC73Q5JTD7 316 aa16.87■□□□□ 0.29
SCARF1-205ENST00000571272 TRAF7Q6Q0C0 670 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms