RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 C3orf18Q9UK00 162 aa16.24■□□□□ 0.19
MAP1LC3B-208ENST00000570189 SCN2AQ99250 2005 aa16.24■□□□□ 0.19
MAP1LC3B-208ENST00000570189 LOC102723996A0A087X1L8 192 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 H0YIG0 161 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 H7BY64 318 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 P2RX6O15547 441 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 NSA2O95478 260 aaKnown RBP16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ENO2P09104 434 aaPredicted RBP16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 IL2P60568 153 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 GNG11P61952 73 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 TSTA3Q13630 321 aaPredicted RBP16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 VWA2Q5GFL6 755 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 THEMIS2Q5TEJ8 643 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 FAM45BPQ6NSW5 357 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 AGTRAPQ6RW13 159 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 SHISA6Q6ZSJ9 500 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 VN1R4Q7Z5H5 301 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 PALM2Q8IXS6 379 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 FAM45AQ8TCE6 357 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 SNF8Q96H20 258 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 PRAP1Q96NZ9 151 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 PSMG3-AS1Q96PY0 264 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 MFRPQ9BY79 579 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 PCDHGA10Q9Y5H3 936 aa16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 SPTAN1Q13813 2472 aaKnown RBP16.23■□□□□ 0.19
MAP1LC3B-208ENST00000570189 SPTBN1Q01082 2364 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 IDSB3KWA1 339 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 MASP2O00187 686 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 MAP2K7O14733 419 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ANXA5P08758 320 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 COX6A1P12074 109 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 GNLYP22749 145 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 UQCRFS1P47985 274 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ITGA8P53708 1063 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ARL4CP56559 192 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 CSNK1G2P78368 415 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 Q0VFX4 171 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 PHKG1Q16816 387 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 PRR30Q53SZ7 412 aaPredicted RBP16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 HECTD2Q5U5R9 776 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 IRAK1BP1Q5VVH5 260 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 B3GNTL1Q67FW5 361 aaPredicted RBP16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 DUPD1Q68J44 220 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 TMEM205Q6UW68 189 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 NDUFAF7Q7L592 441 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 C17orf64Q86WR6 236 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 SPNS2Q8IVW8 549 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 KLHL7Q8IXQ5 586 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ABHD11Q8NFV4 315 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 OR4K1Q8NGD4 311 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 OR56A3Q8NH54 315 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 SNRNP40Q96DI7 357 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 MMABQ96EY8 250 aaPredicted RBP16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 LINGO1Q96FE5 620 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 LMF1Q96S06 567 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 HAUS8Q9BT25 410 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ZBTB20Q9HC78 741 aaPredicted RBP16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 MOCS1Q9NZB8 636 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 TRPC4Q9UBN4 977 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 NOVA2Q9UNW9 492 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 CHMP2BQ9UQN3 213 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 VWA7Q9Y334 891 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 MAST4O15021 2626 aa16.22■□□□□ 0.19
MAP1LC3B-208ENST00000570189 TTI1O43156 1089 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 HIST1H2AGP0C0S8 130 aaPredicted RBP16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 NPPBP16860 134 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 HIST1H2ADP20671 130 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 PAFAH1B1P43034 410 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 TSFMP43897 325 aaKnown RBP16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 EMP2P54851 167 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 PDAP1Q13442 181 aaKnown RBP16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ZXDCQ2QGD7 858 aaPredicted RBP16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 TMEM214Q6NUQ4 689 aaKnown RBP16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 TRMT10BQ6PF06 316 aaKnown RBP16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 RIPOR1Q6ZS17 1223 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ADCK2Q7Z695 626 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 STRA8Q7Z7C7 330 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 CUZD1Q86UP6 607 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 LAPTM4BQ86VI4 370 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 SLC26A11Q86WA9 606 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ZC3H7AQ8IWR0 971 aaKnown RBP16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 CAMKVQ8NCB2 501 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ATL1Q8WXF7 558 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ANP32BQ92688 251 aaKnown RBP16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 FBXL8Q96CD0 374 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 HIST1H2AHQ96KK5 128 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 CAPZA3Q96KX2 299 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 HIST1H2AJQ99878 128 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 MCMBPQ9BTE3 642 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 H2AFJQ9BTM1 129 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 ILKAPQ9H0C8 392 aaPredicted RBP16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 POLEQ07864 2286 aa16.21■□□□□ 0.19
MAP1LC3B-208ENST00000570189 SCN3AQ9NY46 2000 aa16.21■□□□□ 0.18
MAP1LC3B-208ENST00000570189 IGHV1-45A0A0A0MS14 117 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 A0A0A6YYC8 382 aaPredicted RBP16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 TCP11X1B4DZS4 312 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 I3L1I5 382 aaPredicted RBP16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 FANCGO15287 622 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 BMP10O95393 424 aa16.2■□□□□ 0.18
MAP1LC3B-208ENST00000570189 ATXN8OSP0DMR3 200 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms