RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 NDNQ99608 321 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 TRIM51Q9BSJ1 452 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 CRB3Q9BUF7 120 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 TGIF2Q9GZN2 237 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 ALG2Q9H553 416 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 SOX17Q9H6I2 414 aaPredicted RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 ZNF552Q9H707 407 aaPredicted RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 PARVBQ9HBI1 364 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 ATP13A2Q9NQ11 1180 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 SLAMF7Q9NQ25 335 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 PPANQ9NQ55 473 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 CCDC177Q9NQR7 707 aaPredicted RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 SEMA3GQ9NS98 782 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 TMEM184CQ9NVA4 438 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 STOX2Q9P2F5 926 aaPredicted RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 CTSFQ9UBX1 484 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 FBXL4Q9UKA2 621 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 ADAMTS6Q9UKP5 1117 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 VPS4AQ9UN37 437 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 CDC14AQ9UNH5 594 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 CHMP2BQ9UQN3 213 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 PDE10AQ9Y233 779 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 RUVBL1Q9Y265 456 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 B3GNT3Q9Y2A9 372 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 HS3ST3B1Q9Y662 390 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 TEX264Q9Y6I9 313 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 MAU2Q9Y6X3 613 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 SCN2AQ99250 2005 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 SCN3AQ9NY46 2000 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 KCNE1BA0A087WTH5 132 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 EFCAB8A8MWE9 144 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 H0YIG0 161 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 H7BY64 318 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 MAP2K7O14733 419 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 HAT1O14929 419 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 TP73O15350 636 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 TSPAN12O95859 305 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 HPP00738 406 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 ANXA5P08758 320 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 ENO2P09104 434 aaPredicted RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 HIST1H2AGP0C0S8 130 aaPredicted RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 ACPPP15309 386 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 HIST1H2ADP20671 130 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 FDXRP22570 491 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 ITGA3P26006 1051 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 GRK3P35626 688 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 AVPR1BP47901 424 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 AP1S2P56377 157 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 KLC1Q07866 573 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 ILF2Q12905 390 aaKnown RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 CBLBQ13191 982 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 FAM53BQ14153 422 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 UBAP2LQ14157 1087 aaKnown RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 NR6A1Q15406 480 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 RBBP7Q16576 425 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 NDUFA9Q16795 377 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 HKDC1Q2TB90 917 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 VWA2Q5GFL6 755 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 HP1BP3Q5SSJ5 553 aaPredicted RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 HECTD2Q5U5R9 776 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 AGAP7PQ5VUJ5 663 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 IRAK1BP1Q5VVH5 260 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 ATG9BQ674R7 924 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 DUPD1Q68J44 220 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 TRMT10BQ6PF06 316 aaKnown RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 AGTRAPQ6RW13 159 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 KIRREL2Q6UWL6 708 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 LCTLQ6UWM7 567 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 MBOAT1Q6ZNC8 495 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 SHISA6Q6ZSJ9 500 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 SLC26A11Q86WA9 606 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 C17orf64Q86WR6 236 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 TMEM151BQ8IW70 566 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 IQCKQ8N0W5 287 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 ZADH2Q8N4Q0 377 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 ARHGEF39Q8N4T4 335 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 FAM26EQ8N5C1 309 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 AMER3Q8N944 861 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 GPATCH11Q8N954 259 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 Q8NA96 180 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 GALNT11Q8NCW6 608 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 BBOF1Q8ND07 529 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 OR11G2Q8NGC1 345 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 PRR7Q8TB68 274 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 THAP11Q96EK4 314 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 MMABQ96EY8 250 aaPredicted RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 LINGO1Q96FE5 620 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 PDLIM5Q96HC4 596 aaKnown RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 HIST1H2AHQ96KK5 128 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 PWWP2AQ96N64 755 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 PRAP1Q96NZ9 151 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 AGAP4Q96P64 663 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 OLFM1Q99784 485 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 HIST1H2AJQ99878 128 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 WDR83Q9BRX9 315 aaKnown RBP4.55□□□□□ -1.68
CLK3-219ENST00000567805 HAUS8Q9BT25 410 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 H2AFJQ9BTM1 129 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 SGPP1Q9BX95 441 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 TRIM54Q9BYV2 358 aa4.55□□□□□ -1.68
CLK3-219ENST00000567805 SLC29A3Q9BZD2 475 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms