RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MAST2Q6P0Q8 1798 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 C13orf42A0A1B0GVH6 325 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 E9PI62 339 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 PSMD9O00233 223 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 RAB28P51157 221 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 IRF9Q00978 393 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 RGS1Q08116 209 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 CYP51A1Q16850 503 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ABI1Q8IZP0 508 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ARMC10Q8N2F6 343 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 RYBPQ8N488 228 aaPredicted RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 PCDH19Q8TAB3 1148 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 GANCQ8TET4 914 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ARNTL2Q8WYA1 636 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ADIPOR1Q96A54 375 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ZFP42Q96MM3 310 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ZNF583Q96ND8 569 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 NUAK2Q9H093 628 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 C11orf54Q9H0W9 315 aaPredicted RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 ABCG8Q9H221 673 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 EIF2B4Q9UI10 523 aaKnown RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 TINAGQ9UJW2 476 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 RAF1P04049 648 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 FHP07954 510 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 PRKAR1AP10644 381 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 BCAT1P54687 386 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 SNRPD2P62316 118 aaKnown RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 FAM214AQ32MH5 1076 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 GPR33Q49SQ1 333 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 GALNTL5Q7Z4T8 443 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 GPAT4Q86UL3 456 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 XYLT1Q86Y38 959 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 SVOPLQ8N434 492 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 COQ8AQ8NI60 647 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 EXOC2Q96KP1 924 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 NAT9Q9BTE0 207 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 TNKS2Q9H2K2 1166 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 C11orf16Q9NQ32 467 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ZNF175Q9Y473 711 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 PCDHA9Q9Y5H5 950 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 USP3Q9Y6I4 520 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 MFSD2BA6NFX1 497 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 I3L521 148 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 CACNB4O00305 520 aaPredicted RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 MEIS2O14770 477 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 KHNYNO15037 678 aaKnown RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 LRIG2O94898 1065 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 CELF2O95319 508 aaKnown RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 PAPSS2O95340 614 aaPredicted RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 MYL9P24844 172 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 TNFSF8P32971 234 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 CLK1P49759 484 aaKnown RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 ARSFP54793 590 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 DMP1Q13316 513 aaPredicted RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 TBCEQ15813 527 aaPredicted RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 BEX5Q5H9J7 111 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ZNF691Q5VV52 312 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ZNF57Q68EA5 555 aaPredicted RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 CYB5R2Q6BCY4 276 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 PTRHD1Q6GMV3 140 aaKnown RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 BHLHB9Q6PI77 547 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 AFTPHQ6ULP2 937 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 TRMT1LQ7Z2T5 733 aaKnown RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 SNX20Q7Z614 316 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 SYVN1Q86TM6 617 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 SPATA2LQ8IUW3 424 aaPredicted RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 PHYKPLQ8IUZ5 450 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 OR52E4Q8NGH9 312 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 OR6M1Q8NGM8 313 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 C1orf216Q8TAB5 229 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 PIGBQ92521 554 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 CORO2AQ92828 525 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 KLHL15Q96M94 604 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 LINC00052Q96N35 136 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 DCLRE1CQ96SD1 692 aaKnown RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 MXRA8Q9BRK3 442 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 CD93Q9NPY3 652 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 KRT84Q9NSB2 600 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 UXTQ9UBK9 157 aaPredicted RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 LYVE1Q9Y5Y7 322 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 NEDD8-MDP1E9PL57 170 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 PRDX5P30044 214 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 FASTKQ14296 549 aaKnown RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 TARBP2Q15633 366 aaKnown RBP2.84□□□□□ -1.96
CHD9-218ENST00000566029 LRRC26Q2I0M4 334 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ZACNQ401N2 412 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 RAB6CQ53S08 254 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 FAM76BQ5HYJ3 339 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 AFMIDQ63HM1 303 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 RNF180Q86T96 592 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 NECAP1Q8NC96 275 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 SETD9Q8NE22 299 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ZNF555Q8NEP9 628 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 FCGR1BQ92637 280 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 SHARPINQ9H0F6 387 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 RAB6CQ9H0N0 254 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 SH3BGRL3Q9H299 93 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ZCCHC4Q9H5U6 513 aa2.84□□□□□ -1.96
CHD9-218ENST00000566029 ZNF282Q9UDV7 671 aaPredicted RBP2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms