RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 DENND2CQ68D51 928 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 CAPRIN2Q6IMN6 1127 aaKnown RBP5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 TMEM71Q6P5X7 295 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 BRAT1Q6PJG6 821 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 ZNF813Q6ZN06 617 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 GBP6Q6ZN66 633 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 SLC47A2Q86VL8 602 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 KRT73Q86Y46 540 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 DNAAF5Q86Y56 855 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 PPHLN1Q8NEY8 458 aaKnown RBP5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 OR10G6Q8NH81 332 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 PPP1R35Q8TAP8 253 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 HCAR2Q8TDS4 363 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 PATE1Q8WXA2 126 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 NCSTNQ92542 709 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 NT5C3BQ969T7 300 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 TBC1D31Q96DN5 1066 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 RTP4Q96DX8 246 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 ZPBPQ9BS86 351 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 TRIM54Q9BYV2 358 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 PHPT1Q9NRX4 125 aaPredicted RBP5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 TMEM248Q9NWD8 314 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 TMEM9Q9P0T7 183 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 ZNF212Q9UDV6 495 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 USP22Q9UPT9 525 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 MFHAS1Q9Y4C4 1052 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 ATP6V1DQ9Y5K8 247 aa5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 MRPS18BQ9Y676 258 aaKnown RBP5.89□□□□□ -1.47
AP000842.3-201ENST00000564354 IGHV1OR21-1A0A087WYE8 117 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 K7EM74 188 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 FOXN3O00409 490 aaPredicted RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 ADAM10O14672 748 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 POLR1CO15160 346 aaPredicted RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 PMPCBO75439 489 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 RNF8O76064 485 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 DDAH2O95865 285 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 PLEKP08567 350 aaPredicted RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 HOXC4P09017 264 aaPredicted RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 THRAP10827 490 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 SERPINA4P29622 427 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 DLSTP36957 453 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 MMP12P39900 470 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 ACTR1BP42025 376 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 ACTR1AP61163 376 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 POLR2LP62875 67 aaKnown RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 BCL2L1Q07817 233 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 FOXM1Q08050 763 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 RAB32Q13637 225 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 CCNIQ14094 377 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 EXOC3L4Q17RC7 722 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 C2CD6Q53TS8 623 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 TAF3Q5VWG9 929 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 TTI2Q6NXR4 508 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 PNCKQ6P2M8 343 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 TMEM65Q6PI78 240 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 TRIM65Q6PJ69 517 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 DOK6Q6PKX4 331 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 TIPARPQ7Z3E1 657 aaKnown RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 CAMK1DQ8IU85 385 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 ESX1Q8N693 406 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 EMC1Q8N766 993 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 NRACQ8N912 160 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 SHC3Q92529 594 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 MPP4Q96JB8 637 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 ZNF641Q96N77 438 aaPredicted RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 TWSG1Q9GZX9 223 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 STN1Q9H668 368 aaKnown RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 RETREG1Q9H6L5 497 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 ATP13A3Q9H7F0 1226 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 ZMAT3Q9HA38 289 aaKnown RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 ASIC5Q9NY37 505 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 UBA2Q9UBT2 640 aaPredicted RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 DNAJC12Q9UKB3 198 aa5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 DRG1Q9Y295 367 aaKnown RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 UTP20O75691 2785 aaKnown RBP5.88□□□□□ -1.47
AP000842.3-201ENST00000564354 MYO9AB2RTY4 2548 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 LRRK2Q5S007 2527 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 USP9YO00507 2555 aaPredicted RBP5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 A6NCN8 305 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 RASA4BC9J798 803 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 FAM72CH0Y354 149 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 H3BML4 177 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 RASA4O43374 803 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 RGS10O43665 173 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 RASAL1O95294 804 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 PNMA6AP0CW24 399 aaPredicted RBP5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 RHCEP18577 417 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 SDC4P31431 198 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 TRIM23P36406 574 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 DCTP40126 519 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 MTIF2P46199 727 aaKnown RBP5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 GABRB2P47870 512 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 YBEYP58557 167 aaPredicted RBP5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 NFATC2Q13469 925 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 NR1D2Q14995 579 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 CYTH1Q15438 398 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 C15orf59Q2T9L4 293 aaPredicted RBP5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 EIF2S3LQ2VIR3 472 aaKnown RBP5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 TUBB8Q3ZCM7 444 aa5.87□□□□□ -1.47
AP000842.3-201ENST00000564354 FAM72AQ5TYM5 149 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms