RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ACPPP15309 386 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 CLDN8P56748 225 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 RAE1P78406 368 aaKnown RBP17.35■□□□□ 0.37
COMMD4-208ENST00000563220 RBBP5Q15291 538 aaKnown RBP17.35■□□□□ 0.37
COMMD4-208ENST00000563220 ZNF423Q2M1K9 1284 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 C10orf62Q5T681 223 aaPredicted RBP17.35■□□□□ 0.37
COMMD4-208ENST00000563220 AMIGO1Q86WK6 493 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 RNF148Q8N7C7 305 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 LCN9Q8WX39 176 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 UBE2E3Q969T4 207 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 CCDC124Q96CT7 223 aaKnown RBP17.35■□□□□ 0.37
COMMD4-208ENST00000563220 HSPA12BQ96MM6 686 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 GPATCH1Q9BRR8 931 aaKnown RBP17.35■□□□□ 0.37
COMMD4-208ENST00000563220 MIR1-1HGQ9H1L0 117 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 CLMPQ9H6B4 373 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 SLAMF8Q9P0V8 285 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 LEF1Q9UJU2 399 aaPredicted RBP17.35■□□□□ 0.37
COMMD4-208ENST00000563220 TSC22D4Q9Y3Q8 395 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 VCANP13611 3396 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 FEZF1A0PJY2 475 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 FXYD1O00168 92 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 CTSEP14091 401 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 MAPK1P28482 360 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 PIK3CBP42338 1070 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 RACK1P63244 317 aaKnown RBP17.34■□□□□ 0.37
COMMD4-208ENST00000563220 ACSM2AQ08AH3 577 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 DNAH14Q0VDD8 3507 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 C1orf146Q5VVC0 180 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 ACSM2BQ68CK6 577 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 CWF19L1Q69YN2 538 aaKnown RBP17.34■□□□□ 0.37
COMMD4-208ENST00000563220 SLC2A7Q6PXP3 512 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 TAF8Q7Z7C8 310 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 DCP2Q8IU60 420 aaKnown RBP17.34■□□□□ 0.37
COMMD4-208ENST00000563220 TMEFF1Q8IYR6 380 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 C1orf52Q8N6N3 182 aaKnown RBP17.34■□□□□ 0.37
COMMD4-208ENST00000563220 ANKRD53Q8N9V6 530 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 C1orf216Q8TAB5 229 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 METTL2AQ96IZ6 378 aaKnown RBP17.34■□□□□ 0.37
COMMD4-208ENST00000563220 AIF1LQ9BQI0 150 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 OR51B5Q9H339 312 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 POMPQ9Y244 141 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 L3MBTL1Q9Y468 752 aa17.34■□□□□ 0.37
COMMD4-208ENST00000563220 DYTNA2CJ06 578 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 TBX6O95947 436 aaPredicted RBP17.33■□□□□ 0.37
COMMD4-208ENST00000563220 JUNDP17535 347 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 CSNK1G2P78368 415 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 REEP5Q00765 189 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 TRMT5Q32P41 509 aaKnown RBP17.33■□□□□ 0.37
COMMD4-208ENST00000563220 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.33■□□□□ 0.37
COMMD4-208ENST00000563220 GLB1L3Q8NCI6 653 aaPredicted RBP17.33■□□□□ 0.37
COMMD4-208ENST00000563220 GPR156Q8NFN8 814 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 LRRC58Q96CX6 371 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 SPACA7Q96KW9 195 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 TMEM74Q96NL1 305 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 SERPINI1Q99574 410 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 ZBTB18Q99592 522 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 RHBGQ9H310 441 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 TM9SF3Q9HD45 589 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 ADA2Q9NZK5 511 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 OR6C2Q9NZP2 312 aa17.33■□□□□ 0.37
COMMD4-208ENST00000563220 RUVBL1Q9Y265 456 aaKnown RBP17.33■□□□□ 0.37
COMMD4-208ENST00000563220 LRP4O75096 1905 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 TLR4O00206 839 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 SAP18O00422 153 aaKnown RBP17.33■□□□□ 0.36
COMMD4-208ENST00000563220 BTN3A3O00478 584 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 LCMT2O60294 686 aaKnown RBP17.33■□□□□ 0.36
COMMD4-208ENST00000563220 KDM1AO60341 852 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 CHRM5P08912 532 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-208ENST00000563220 XRCC1P18887 633 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-208ENST00000563220 CXCR2P25025 360 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 SHMT2P34897 504 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 MSX2P35548 267 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-208ENST00000563220 ERFP50548 548 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 BLKP51451 505 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 ACTR3P61158 418 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 CAPRIN1Q14444 709 aaKnown RBP17.33■□□□□ 0.36
COMMD4-208ENST00000563220 FAM174BQ3ZCQ3 159 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 PRRT3Q5FWE3 981 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 SPANXN4Q5MJ08 99 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 TSSK4Q6SA08 328 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 SLC36A4Q6YBV0 504 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 ARMCX6Q7L4S7 300 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 ADGRF3Q8IZF5 1079 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 NAGSQ8N159 534 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 FBXL6Q8N531 539 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 MINDY1Q8N5J2 469 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 HOPXQ9BPY8 73 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-208ENST00000563220 LRRC61Q9BV99 259 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 RNPEPL1Q9HAU8 725 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 GID8Q9NWU2 228 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 TMEM181Q9P2C4 612 aa17.33■□□□□ 0.36
COMMD4-208ENST00000563220 APOBEC3BQ9UH17 382 aaKnown RBP17.33■□□□□ 0.36
COMMD4-208ENST00000563220 KNL1Q8NG31 2342 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 LRATO95237 230 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 PHC1P78364 1004 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 NFYCQ13952 458 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 MAMSTRQ6ZN01 415 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 IQCHQ86VS3 1027 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 PLD3Q8IV08 490 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms