RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TCEAL8Q8IYN2 117 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 NAT16Q8N8M0 369 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 SKA2Q8WVK7 121 aaPredicted RBP12.66□□□□□ -0.38
USB1-207ENST00000563149 ATL1Q8WXF7 558 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 SLC38A4Q969I6 547 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 LGALS12Q96DT0 336 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 C7orf34Q96L11 122 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 SLC22A12Q96S37 553 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 P2RY13Q9BPV8 354 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 DUSP26Q9BV47 211 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 TPT1P8Q9HAU6 139 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 OSGIN1Q9UJX0 560 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 ITGB1BP2Q9UKP3 347 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 WDR37Q9Y2I8 494 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 PADI2Q9Y2J8 665 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 A8MX80 341 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 H0YIV9 168 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 QSOX1O00391 747 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 PRRG1O14668 218 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 AXIN1O15169 862 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 C1SP09871 688 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 TGM1P22735 817 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 FSHRP23945 695 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 CD40LGP29965 261 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 VBP1P61758 197 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 ZXDBP98169 803 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 ELP6Q0PNE2 266 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 CAMK2GQ13555 558 aaPredicted RBP12.66□□□□□ -0.38
USB1-207ENST00000563149 ELOAQ14241 798 aaKnown RBP12.66□□□□□ -0.38
USB1-207ENST00000563149 TCTN1Q2MV58 587 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 AGAP7PQ5VUJ5 663 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 VTCN1Q7Z7D3 282 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 P3H2Q8IVL5 708 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 VOPP1Q96AW1 172 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 PYCR2Q96C36 320 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 C11orf24Q96F05 449 aaPredicted RBP12.66□□□□□ -0.38
USB1-207ENST00000563149 HERC2P3Q9BVR0 1158 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 ITPAQ9BY32 194 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 CHST8Q9H2A9 424 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 MRPL17Q9NRX2 175 aaKnown RBP12.66□□□□□ -0.38
USB1-207ENST00000563149 SRRDQ9UH36 339 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 A3GALT2U3KPV4 340 aa12.66□□□□□ -0.38
USB1-207ENST00000563149 PIKFYVEQ9Y2I7 2098 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 ISPDA4D126 451 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 A8MVJ9 347 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 TTC34A8MYJ7 566 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 TOR1BO14657 336 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 SCAMP2O15127 329 aaKnown RBP12.65□□□□□ -0.38
USB1-207ENST00000563149 SUV39H1O43463 412 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 ADAM23O75077 832 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 WBP4O75554 376 aaKnown RBP12.65□□□□□ -0.38
USB1-207ENST00000563149 POP4O95707 220 aaKnown RBP12.65□□□□□ -0.38
USB1-207ENST00000563149 FADS2O95864 444 aaKnown RBP12.65□□□□□ -0.38
USB1-207ENST00000563149 GSTM1P09488 218 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 BMP4P12644 408 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 CD36P16671 472 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 LHCGRP22888 699 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 PCGF2P35227 344 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 KRT20P35900 424 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 TGFBR2P37173 567 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 PPP5CP53041 499 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 POLR2LP62875 67 aaKnown RBP12.65□□□□□ -0.38
USB1-207ENST00000563149 KCNJ10P78508 379 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 SP3Q02447 781 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 ACSM2AQ08AH3 577 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 LAPTM4AQ15012 233 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 ACSM2BQ68CK6 577 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 LHX8Q68G74 356 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 GRHL2Q6ISB3 625 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 PDE12Q6L8Q7 609 aaKnown RBP12.65□□□□□ -0.38
USB1-207ENST00000563149 BTLAQ7Z6A9 289 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 PLD3Q8IV08 490 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 VRK3Q8IV63 474 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 ENTHD1Q8IYW4 607 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 KIAA1958Q8N8K9 716 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 RHOXF1Q8NHV9 184 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 ASZ1Q8WWH4 475 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 CLP1Q92989 425 aaKnown RBP12.65□□□□□ -0.38
USB1-207ENST00000563149 MYDGFQ969H8 173 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 TIFAQ96CG3 184 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 CXorf40BQ96DE9 158 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 DACH2Q96NX9 599 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 BTBD2Q9BX70 525 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 SLIRPQ9GZT3 109 aaKnown RBP12.65□□□□□ -0.38
USB1-207ENST00000563149 MMP27Q9H306 513 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 ARMC7Q9H6L4 198 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 IL21Q9HBE4 155 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 ZNF334Q9HCZ1 680 aaPredicted RBP12.65□□□□□ -0.38
USB1-207ENST00000563149 ZNF282Q9UDV7 671 aaPredicted RBP12.65□□□□□ -0.38
USB1-207ENST00000563149 FZD4Q9ULV1 537 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 HS3ST2Q9Y278 367 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 SH3BP1Q9Y3L3 701 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 INSL5Q9Y5Q6 135 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 PMF1-BGLAPU3KQ54 211 aa12.65□□□□□ -0.38
USB1-207ENST00000563149 C1orf226A1L170 272 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 TMEM247A6NEH6 219 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 ADAMDEC1O15204 470 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 MAN1A2O60476 641 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 CNOT3O75175 753 aaKnown RBP12.64□□□□□ -0.39
USB1-207ENST00000563149 DIRAS1O95057 198 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms