RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 TRIP13Q15645 432 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-202ENST00000562722 KCTD19Q17RG1 926 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-202ENST00000562722 KIAA0930Q6ICG6 404 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-202ENST00000562722 ZNF425Q6IV72 752 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 MRGPRGQ86SM5 289 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 REXO1L1PQ8IX06 675 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 DNAJB8Q8NHS0 232 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 MCOLN3Q8TDD5 553 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 OR2A5Q96R48 311 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 EBNA1BP2Q99848 306 aaKnown RBP12.31□□□□□ -0.44
SF3B3-202ENST00000562722 STMN3Q9NZ72 180 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 SAMD15Q9P1V8 674 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 ABI3Q9P2A4 366 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 C19orf25Q9UFG5 118 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-202ENST00000562722 SOX13Q9UN79 622 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 DIDO1Q9BTC0 2240 aaKnown RBP12.31□□□□□ -0.44
SF3B3-202ENST00000562722 CELSR2Q9HCU4 2923 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 CNTRLQ7Z7A1 2325 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 LOC102723996A0A087X1L8 192 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 IGHV3-20A0A0C4DH32 117 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 GOLGA6L6A8MZA4 724 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 FGGP02679 453 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 SNRPB2P08579 225 aaKnown RBP12.3□□□□□ -0.44
SF3B3-202ENST00000562722 F7P08709 466 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-202ENST00000562722 TPSB2P20231 275 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 MST1P26927 711 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 GRNP28799 593 aaKnown RBP12.3□□□□□ -0.44
SF3B3-202ENST00000562722 KCNJ1P48048 391 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 VPS41P49754 854 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 ADARP55265 1226 aaKnown RBP12.3□□□□□ -0.44
SF3B3-202ENST00000562722 SARNPP82979 210 aaKnown RBP12.3□□□□□ -0.44
SF3B3-202ENST00000562722 CDK16Q00536 496 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 PMP22Q01453 160 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 ART3Q13508 389 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 THOC5Q13769 683 aaKnown RBP12.3□□□□□ -0.44
SF3B3-202ENST00000562722 SIX1Q15475 284 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-202ENST00000562722 TPSAB1Q15661 275 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 BTBD16Q32M84 506 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 MEI1Q5TIA1 1274 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 ZNF470Q6ECI4 717 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 NEPROQ6NW34 567 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 MTFR2Q6P444 385 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 DRICH1Q6PGQ1 229 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-202ENST00000562722 TMEM205Q6UW68 189 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 CILP2Q8IUL8 1156 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 OR9A4Q8NGU2 314 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 ZNF480Q8WV37 535 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 MAIP1Q8WWC4 291 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 ITLN2Q8WWU7 325 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-202ENST00000562722 CCDC120Q96HB5 630 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 VN1R1Q9GZP7 353 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 RNF32Q9H0A6 362 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 INTS10Q9NVR2 710 aaKnown RBP12.3□□□□□ -0.44
SF3B3-202ENST00000562722 SVILO95425 2214 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 CRYBG3Q68DQ2 2970 aa12.3□□□□□ -0.44
SF3B3-202ENST00000562722 TCRBV7S3A2A0A539 114 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 E7ENX8 843 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 FAM227AF5H4B4 570 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 H7BY64 318 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 ZBTB14O43829 449 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 AVILO75366 819 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 HTR1EP28566 365 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 CLCN7P51798 805 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 TAP2Q03519 686 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 DHX34Q14147 1143 aaKnown RBP12.29□□□□□ -0.44
SF3B3-202ENST00000562722 FAM53BQ14153 422 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.29□□□□□ -0.444e-7■□□□□ 10.1
SF3B3-202ENST00000562722 ZNF766Q5HY98 468 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 FCRLBQ6BAA4 426 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 RPTNQ6XPR3 784 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 LANCL3Q6ZV70 420 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 CENPUQ71F23 418 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 CPEB2Q7Z5Q1 589 aaKnown RBP12.29□□□□□ -0.44
SF3B3-202ENST00000562722 AMER2Q8N7J2 671 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 PRELID2Q8N945 189 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 ZNF669Q96BR6 464 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-202ENST00000562722 IMMP1LQ96LU5 166 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 PRAP1Q96NZ9 151 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 SLC30A3Q99726 388 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 FBXO6Q9NRD1 293 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-202ENST00000562722 HCN3Q9P1Z3 774 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 ZKSCAN5Q9Y2L8 839 aa12.29□□□□□ -0.44
SF3B3-202ENST00000562722 KLF2Q9Y5W3 355 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-202ENST00000562722 H0YIG0 161 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 ESRRAP11474 423 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-202ENST00000562722 COX6B1P14854 86 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 IL1RNP18510 177 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 CA7P43166 264 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 XCR1P46094 333 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 RELAQ04206 551 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 GPS1Q13098 491 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 PTK6Q13882 451 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 BNC2Q6ZN30 1099 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-202ENST00000562722 UBE2R2Q712K3 238 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-202ENST00000562722 GDF7Q7Z4P5 450 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 BEST3Q8N1M1 668 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 ARHGEF39Q8N4T4 335 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 ZNF808Q8N4W9 903 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-202ENST00000562722 GIMAP7Q8NHV1 300 aa12.28□□□□□ -0.44
SF3B3-202ENST00000562722 ZCCHC10Q8TBK6 192 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms