RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 GNAZP19086 355 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 ITGAXP20702 1163 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 SCTRP47872 440 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 HSPA7P48741 367 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 AGTR2P50052 363 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 CCR8P51685 355 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 ARF3P61204 181 aaPredicted RBP12.83□□□□□ -0.36
CDH1-204ENST00000562118 THEMIS2Q5TEJ8 643 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 PRAMEF17Q5VTA0 474 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 NLGN4XQ8N0W4 816 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 OR4N4Q8N0Y3 316 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 ESX1Q8N693 406 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 MYRIPQ8NFW9 859 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 NLGN4YQ8NFZ3 816 aaPredicted RBP12.83□□□□□ -0.36
CDH1-204ENST00000562118 PROKR1Q8TCW9 393 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 SEC16BQ96JE7 1060 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 C10orf90Q96M02 699 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 GBP5Q96PP8 586 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 DPH2Q9BQC3 489 aaPredicted RBP12.83□□□□□ -0.36
CDH1-204ENST00000562118 SELENOSQ9BQE4 189 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 SPRTNQ9H040 489 aaPredicted RBP12.83□□□□□ -0.36
CDH1-204ENST00000562118 SPNS1Q9H2V7 528 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 NT5DC2Q9H857 520 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 WWOXQ9NZC7 414 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 DCDC2Q9UHG0 476 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 ZMIZ1Q9ULJ6 1067 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 SRPK3Q9UPE1 567 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 TSC22D4Q9Y3Q8 395 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 PCDHGA6Q9Y5G7 932 aa12.83□□□□□ -0.36
CDH1-204ENST00000562118 SRRM3A6NNA2 597 aaPredicted RBP12.82□□□□□ -0.36
CDH1-204ENST00000562118 FOXO6A8MYZ6 492 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 SUPT3HB4E1H0 165 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 P2RX6O15547 441 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 ZNF749O43361 778 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 LCMT2O60294 686 aaKnown RBP12.82□□□□□ -0.36
CDH1-204ENST00000562118 GLRA3O75311 464 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 ERLIN1O75477 346 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 SUPT3HO75486 399 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 MED26O95402 600 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 HBQ1P09105 142 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 H2AFXP16104 143 aaPredicted RBP12.82□□□□□ -0.36
CDH1-204ENST00000562118 CD22P20273 847 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 GSTM2P28161 218 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 AHRP35869 848 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 BCL6P41182 706 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 TLE3Q04726 772 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 GPS2Q13227 327 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 GRM7Q14831 915 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 PDK4Q16654 411 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 MANEAQ5SRI9 462 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 CATSPEREQ5SY80 951 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 GARNL3Q5VVW2 1013 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 C6orf15Q6UXA7 325 aaPredicted RBP12.82□□□□□ -0.36
CDH1-204ENST00000562118 TMEM126BQ8IUX1 230 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 SPACA3Q8IXA5 215 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 BANPQ8N9N5 519 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 MFSD9Q8NBP5 474 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 KCNE4Q8WWG9 221 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 ZIM3Q96PE6 472 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 ACTR5Q9H9F9 607 aaPredicted RBP12.82□□□□□ -0.36
CDH1-204ENST00000562118 LHX9Q9NQ69 397 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 GEMIN8Q9NWZ8 242 aaKnown RBP12.82□□□□□ -0.36
CDH1-204ENST00000562118 TNPO3Q9Y5L0 923 aaKnown RBP12.82□□□□□ -0.36
CDH1-204ENST00000562118 NUP210LQ5VU65 1888 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 ATMQ13315 3056 aa12.82□□□□□ -0.36
CDH1-204ENST00000562118 A0A0J9YVX5 310 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 TEX51A0A1B0GUA7 166 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 A8MT66 165 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 C21orf140B9A014 251 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 G3V2L1 256 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 GOLGA8RI6L899 631 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 EFSO43281 561 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 PLIN3O60664 434 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 UGDHO60701 494 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 TBX6O95947 436 aaPredicted RBP12.81□□□□□ -0.36
CDH1-204ENST00000562118 RECKO95980 971 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 PROCP04070 461 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 S100BP04271 92 aaPredicted RBP12.81□□□□□ -0.36
CDH1-204ENST00000562118 C1GALT1C1LP0DN25 315 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 KRT4P19013 534 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 ARSFP54793 590 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 HYAL2Q12891 473 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 TSTA3Q13630 321 aaPredicted RBP12.81□□□□□ -0.36
CDH1-204ENST00000562118 TGIF1Q15583 401 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 PFKFB4Q16877 469 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 CRTC2Q53ET0 693 aaPredicted RBP12.81□□□□□ -0.36
CDH1-204ENST00000562118 WASHC2DQ5SRD0 308 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 FAM198BQ6UWH4 519 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 GPR135Q8IZ08 494 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 ANKRD53Q8N9V6 530 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 GALNT6Q8NCL4 622 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 ZNF740Q8NDX6 193 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 NT5CQ8TCD5 201 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 CREB3L4Q8TEY5 395 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 ZNF483Q8TF39 744 aaPredicted RBP12.81□□□□□ -0.36
CDH1-204ENST00000562118 ESAMQ96AP7 390 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 MVB12AQ96EY5 273 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 PTCD3Q96EY7 689 aaKnown RBP12.81□□□□□ -0.36
CDH1-204ENST00000562118 PGM2Q96G03 612 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 TSNARE1Q96NA8 513 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms