RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 NCF1BA6NI72 391 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 NCF1CA8MVU1 366 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 FOXS1O43638 330 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 FAM155BO75949 473 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 URI1O94763 535 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 CELA2AP08217 269 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 ZGLP1P0C6A0 271 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 NCF1P14598 390 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 BCL6P41182 706 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 UQCRFS1P47985 274 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 CSRP3P50461 194 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 ST13P50502 369 aaKnown RBP9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 RRADP55042 308 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 ABATP80404 500 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 FOXK1P85037 733 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 OCA2Q04671 838 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 EFTUD2Q15029 972 aaKnown RBP eCLIP9.01□□□□□ -0.973e-6■■■■■ 41.9
NSMCE1-203ENST00000562039 CATSPEREQ5SY80 951 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 MFSD4BQ5TF39 518 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 KIRREL2Q6UWL6 708 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 KIAA0408Q6ZU52 694 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 VN1R4Q7Z5H5 301 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 CNTRLQ7Z7A1 2325 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 CTAGE6Q86UF2 777 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 ZC3HC1Q86WB0 502 aaKnown RBP9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 C17orf64Q86WR6 236 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 CTAGE3PQ8IX95 158 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 CLEC1AQ8NC01 280 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 KCT2Q8NC54 265 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 EXT2Q93063 718 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 FKBP10Q96AY3 582 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 DOCK10Q96BY6 2186 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 LRRC39Q96DD0 335 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 MOCOSQ96EN8 888 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 FER1L6-AS2Q96M78 137 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 EGFL8Q99944 293 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 SPNS1Q9H2V7 528 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 ZNF160Q9HCG1 818 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 RNF14Q9UBS8 474 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 C3orf18Q9UK00 162 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 G3BP2Q9UN86 482 aaKnown RBP9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 ZNF451Q9Y4E5 1061 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 KLK4Q9Y5K2 254 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 CSAG2Q9Y5P2 127 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 MYO18BQ8IUG5 2567 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 IGHV3-20A0A0C4DH32 117 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 VSTM2BA6NLU5 285 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 E7ESA3 106 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 SGK494L7N484 410 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 AGPSO00116 658 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 EIF3FO00303 357 aaPredicted RBP9□□□□□ -0.97
NSMCE1-203ENST00000562039 SLC16A5O15375 505 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 DNAJB6O75190 326 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 CEACAM4O75871 244 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 F10P00742 488 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 HEXBP07686 556 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 ANXA5P08758 320 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 EZRP15311 586 aaKnown RBP9□□□□□ -0.97
NSMCE1-203ENST00000562039 NPPBP16860 134 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 GNLYP22749 145 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 MMP11P24347 488 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 VARSP26640 1264 aaKnown RBP9□□□□□ -0.97
NSMCE1-203ENST00000562039 HNF4AP41235 474 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 GDF5P43026 501 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 EFNA3P52797 238 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 EMP2P54851 167 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 GPX6P59796 221 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 OLR1P78380 273 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 Q0VFX4 171 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 TSNQ15631 228 aaKnown RBP9□□□□□ -0.97
NSMCE1-203ENST00000562039 TUBB8Q3ZCM7 444 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 PLEKHN1Q494U1 663 aaPredicted RBP9□□□□□ -0.97
NSMCE1-203ENST00000562039 UBAP2Q5T6F2 1119 aaKnown RBP9□□□□□ -0.97
NSMCE1-203ENST00000562039 YOD1Q5VVQ6 348 aaPredicted RBP9□□□□□ -0.97
NSMCE1-203ENST00000562039 DUPD1Q68J44 220 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 SLC6A19Q695T7 634 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 CAPN13Q6MZZ7 669 aaPredicted RBP9□□□□□ -0.97
NSMCE1-203ENST00000562039 ZDHHC24Q6UX98 284 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 LINC00696Q6ZRV3 163 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 MAATS1Q7Z4T9 603 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 SLC26A11Q86WA9 606 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 PPM1NQ8N819 430 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 AMER3Q8N944 861 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 Q8NA96 180 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 BBOF1Q8ND07 529 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 ZNF740Q8NDX6 193 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 CPT1CQ8TCG5 803 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 ESAMQ96AP7 390 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 C19orf60Q96EN9 201 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 THOC3Q96J01 351 aaKnown RBP9□□□□□ -0.97
NSMCE1-203ENST00000562039 VPS39Q96JC1 886 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 MAGEB10Q96LZ2 347 aaPredicted RBP9□□□□□ -0.97
NSMCE1-203ENST00000562039 OR4K3Q96R72 315 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 LRRC1Q9BTT6 524 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 TRIM54Q9BYV2 358 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 DRC3Q9H069 523 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 ZNF552Q9H707 407 aaPredicted RBP9□□□□□ -0.97
NSMCE1-203ENST00000562039 GPAMQ9HCL2 828 aa9□□□□□ -0.97
NSMCE1-203ENST00000562039 MLXIPLQ9NP71 852 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms