RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 RERGQ96A58 199 aaPredicted RBP11.04□□□□□ -0.64
USP3-220ENST00000561381 MVB12AQ96EY5 273 aa11.04□□□□□ -0.64
USP3-220ENST00000561381 MAGEB10Q96LZ2 347 aaPredicted RBP11.04□□□□□ -0.64
USP3-220ENST00000561381 TAAR6Q96RI8 345 aa11.04□□□□□ -0.64
USP3-220ENST00000561381 MACROD1Q9BQ69 325 aa11.04□□□□□ -0.64
USP3-220ENST00000561381 SLX1AQ9BQ83 275 aa11.04□□□□□ -0.64
USP3-220ENST00000561381 DRC3Q9H069 523 aa11.04□□□□□ -0.64
USP3-220ENST00000561381 OLAHQ9NV23 265 aa11.04□□□□□ -0.64
USP3-220ENST00000561381 INTS10Q9NVR2 710 aaKnown RBP11.04□□□□□ -0.64
USP3-220ENST00000561381 SAMD15Q9P1V8 674 aa11.04□□□□□ -0.64
USP3-220ENST00000561381 CDC14AQ9UNH5 594 aa11.04□□□□□ -0.64
USP3-220ENST00000561381 CREBBPQ92793 2442 aa11.04□□□□□ -0.64
USP3-220ENST00000561381 A0A1W2PQ72 361 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 SDR42E2A6NKP2 422 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 H7BY64 318 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 GFYI3L273 518 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 ZG16O60844 167 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 PHF2O75151 1096 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 CCNDBP1O95273 360 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 SERPINA7P05543 415 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 HEXBP07686 556 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 ITGAMP11215 1152 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 EZRP15311 586 aaKnown RBP11.03□□□□□ -0.64
USP3-220ENST00000561381 CXCR2P25025 360 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 IMPA1P29218 277 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 HSD17B2P37059 387 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 SLC1A2P43004 574 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 TNFSF10P50591 281 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 SARNPP82979 210 aaKnown RBP11.03□□□□□ -0.64
USP3-220ENST00000561381 MPP1Q00013 466 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 THOC5Q13769 683 aaKnown RBP11.03□□□□□ -0.64
USP3-220ENST00000561381 PCOLCEQ15113 449 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 TTLL9Q3SXZ7 439 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 GARNL3Q5VVW2 1013 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 ZNF324BQ6AW86 544 aaPredicted RBP11.03□□□□□ -0.64
USP3-220ENST00000561381 NEK10Q6ZWH5 1172 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 PRSS41Q7RTY9 318 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 PIWIL4Q7Z3Z4 852 aaKnown RBP11.03□□□□□ -0.64
USP3-220ENST00000561381 CPNE9Q8IYJ1 553 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 BCORP1Q8N888 145 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 TRIM58Q8NG06 486 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 OR9A4Q8NGU2 314 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 CD200R1Q8TD46 325 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 MAGOHBQ96A72 148 aaKnown RBP11.03□□□□□ -0.64
USP3-220ENST00000561381 MS4A14Q96JA4 679 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 PRAP1Q96NZ9 151 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 SERPINB12Q96P63 405 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 GPR21Q99679 349 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 TGIF2Q9GZN2 237 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 MKKSQ9NPJ1 570 aaPredicted RBP11.03□□□□□ -0.64
USP3-220ENST00000561381 HOMER3Q9NSC5 361 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 C14orf105Q9NVL8 296 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 MKL2Q9ULH7 1088 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 SH2B3Q9UQQ2 575 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 DHRS7Q9Y394 339 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 NEU2Q9Y3R4 380 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 MYO7BQ6PIF6 2116 aa11.03□□□□□ -0.64
USP3-220ENST00000561381 SCN3AQ9NY46 2000 aa11.02□□□□□ -0.64
USP3-220ENST00000561381 ITPR2Q14571 2701 aa11.02□□□□□ -0.64
USP3-220ENST00000561381 LOC102723996A0A087X1L8 192 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 IGHV3-20A0A0C4DH32 117 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 DYTNA2CJ06 578 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 OR2W5A6NFC9 320 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 ZNF839A8K0R7 811 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 PRPF4O43172 522 aaKnown RBP eCLIP11.02□□□□□ -0.65
USP3-220ENST00000561381 HAUS5O94927 633 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 BMP10O95393 424 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 WDPCPO95876 746 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 STSP08842 583 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 MPC1LP0DKB6 136 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 SKIV2L2P42285 1042 aaKnown RBP11.02□□□□□ -0.65
USP3-220ENST00000561381 TDGF1P3P51864 188 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 ABATP80404 500 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 ZRSR2Q15696 482 aaKnown RBP11.02□□□□□ -0.65
USP3-220ENST00000561381 THEMIS2Q5TEJ8 643 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 C1QL3Q5VWW1 255 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 RPUSD3Q6P087 351 aaKnown RBP11.02□□□□□ -0.65
USP3-220ENST00000561381 TMEM205Q6UW68 189 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 MBOAT1Q6ZNC8 495 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 VN1R4Q7Z5H5 301 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 FJX1Q86VR8 437 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 FBXO15Q8NCQ5 510 aaPredicted RBP11.02□□□□□ -0.65
USP3-220ENST00000561381 MCUQ8NE86 351 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 KCNJ9Q92806 393 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 HAS2Q92819 552 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 IMMP1LQ96LU5 166 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 VN1R1Q9GZP7 353 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 ZNF700Q9H0M5 742 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 CCDC68Q9H2F9 335 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 C20orf96Q9NUD7 363 aaPredicted RBP11.02□□□□□ -0.65
USP3-220ENST00000561381 RIC8BQ9NVN3 520 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 UTP6Q9NYH9 597 aaKnown RBP11.02□□□□□ -0.65
USP3-220ENST00000561381 KLHL42Q9P2K6 505 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 FBXO5Q9UKT4 447 aa11.02□□□□□ -0.65
USP3-220ENST00000561381 TRAV17A0A0B4J275 112 aa11.01□□□□□ -0.65
USP3-220ENST00000561381 MAGEB16A2A368 324 aa11.01□□□□□ -0.65
USP3-220ENST00000561381 PCDH17O14917 1159 aa11.01□□□□□ -0.65
USP3-220ENST00000561381 ZBTB14O43829 449 aa11.01□□□□□ -0.65
USP3-220ENST00000561381 WFS1O76024 890 aa11.01□□□□□ -0.65
USP3-220ENST00000561381 WISP2O76076 250 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms