RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TMEM39AQ9NV64 488 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 SPEF1Q9Y4P9 236 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 ARIH1Q9Y4X5 557 aaPredicted RBP15.98■□□□□ 0.15
TPM1-228ENST00000560975 CENPFP49454 3210 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 A0A0D9SEW6 157 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 SMIM35A0A1B0GVV1 85 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 KCNK5O95279 499 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 CD72P21854 359 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 MYL9P24844 172 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 CLCN7P51798 805 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 C19orf57Q0VDD7 668 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 MOB2Q70IA6 237 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 ADAMTSL2Q86TH1 951 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 CDC26Q8NHZ8 85 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 KCNJ9Q92806 393 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 TRIB3Q96RU7 358 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 MROH8Q9H579 483 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 PLCXD1Q9NUJ7 323 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 IMPAD1Q9NX62 359 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 TRAPPC4Q9Y296 219 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 PCDHGC4Q9Y5F7 938 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 KLK4Q9Y5K2 254 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 LTBP3Q9NS15 1303 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 A0A0G2JLL6 359 aaPredicted RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 EPOP01588 193 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 CCNYL3P0C7X3 344 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 IL12RB1P42701 662 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 OLR1P78380 273 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 CDC42EP1Q00587 391 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 EFR3AQ14156 821 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 PRRT2Q7Z6L0 340 aaPredicted RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 METTL23Q86XA0 190 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 FAM109AQ8N4B1 249 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 WDR36Q8NI36 951 aaKnown RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 ANGPTL6Q8NI99 470 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 PANX1Q96RD7 426 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 SPON2Q9BUD6 331 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 GABARAPL3Q9BY60 117 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 ACPTQ9BZG2 426 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 TEKT2Q9UIF3 430 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 TRIP12Q14669 1992 aaPredicted RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 A0A0B4J293 547 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 ZNF780AO75290 641 aaPredicted RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 SEMG1P04279 462 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 NUDT7P0C024 238 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 HOXB6P17509 224 aaKnown RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 HYAL2Q12891 473 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 TAF1AQ15573 450 aaPredicted RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 SSX1Q16384 188 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 NFE2Q16621 373 aaPredicted RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 EIF3MQ7L2H7 374 aaKnown RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 FAM124AQ86V42 546 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 SPATA2LQ8IUW3 424 aaPredicted RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 FAM20CQ8IXL6 584 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 CAMKK1Q8N5S9 505 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 SPPL2AQ8TCT8 520 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 GPR152Q8TDT2 470 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 RNF31Q96EP0 1072 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 ACBD6Q9BR61 282 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 MKRN2Q9H000 416 aaKnown RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 C11orf54Q9H0W9 315 aaPredicted RBP15.97■□□□□ 0.15
TPM1-228ENST00000560975 ZNF408Q9H9D4 720 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 FKBP14Q9NWM8 211 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 SNX7Q9UNH6 387 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 MAN2B2Q9Y2E5 1009 aa15.97■□□□□ 0.15
TPM1-228ENST00000560975 STX7O15400 261 aaKnown RBP15.96■□□□□ 0.15
TPM1-228ENST00000560975 ODC1P11926 461 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 LPOP22079 712 aaPredicted RBP15.96■□□□□ 0.15
TPM1-228ENST00000560975 SOX3P41225 446 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 GPR15P49685 360 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 CLDN8P56748 225 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 FAM131AQ6UXB0 335 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 ATCAYQ86WG3 371 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 PTOV1Q86YD1 416 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 YIPF7Q8N8F6 280 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 RERGLQ9H628 205 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 MAT2BQ9NZL9 334 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 FNIP2Q9P278 1114 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 TLR6Q9Y2C9 796 aa15.96■□□□□ 0.15
TPM1-228ENST00000560975 SMLR1H3BR10 107 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 TNFRSF11BO00300 401 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 FPGTO14772 594 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 PRAMEF11O60813 436 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 WDR47O94967 919 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 SNAI1O95863 264 aaPredicted RBP15.96■□□□□ 0.14
TPM1-228ENST00000560975 POMCP01189 267 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 PDYNP01213 254 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 SSTR4P31391 388 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 CSTF3Q12996 717 aaKnown RBP15.96■□□□□ 0.14
TPM1-228ENST00000560975 NADSYN1Q6IA69 706 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 SDE2Q6IQ49 451 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 CBLL1Q75N03 491 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 SLC44A2Q8IWA5 706 aaPredicted RBP15.96■□□□□ 0.14
TPM1-228ENST00000560975 OR7D4Q8NG98 312 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 DEDD2Q8WXF8 326 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 MAL2Q969L2 176 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 RAD9AQ99638 391 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 NIPSNAP1Q9BPW8 284 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 EBPLQ9BY08 206 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms