RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 TNPO3Q9Y5L0 923 aaKnown RBP13.4□□□□□ -0.26
PKNOX1-209ENST00000560448 FREM2Q5SZK8 3169 aa13.4□□□□□ -0.26
PKNOX1-209ENST00000560448 TPRP12270 2363 aaKnown RBP13.4□□□□□ -0.26
PKNOX1-209ENST00000560448 SNRNP200O75643 2136 aaKnown RBP13.4□□□□□ -0.26
PKNOX1-209ENST00000560448 IGKV1-8A0A0C4DH67 115 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 C21orf140B9A014 251 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 KLK10O43240 276 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 KLK8O60259 260 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 STK16O75716 305 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 KRT4P19013 534 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 CCR8P51685 355 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 DLG1Q12959 904 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 OR4D1Q15615 310 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 GLIPR1L2Q4G1C9 344 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 GARNL3Q5VVW2 1013 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 ZNF517Q6ZMY9 492 aaPredicted RBP13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 ADCK2Q7Z695 626 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 THOC6Q86W42 341 aaKnown RBP13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 ZFAND4Q86XD8 727 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 SPACA3Q8IXA5 215 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 CACNA2D3Q8IZS8 1091 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 SPATA6LQ8N4H0 392 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 TTC29Q8NA56 475 aaPredicted RBP13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 OR4K1Q8NGD4 311 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 MGARPQ8TDB4 240 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 UBTD2Q8WUN7 234 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 SLC5A11Q8WWX8 675 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 NKD1Q969G9 470 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 PMEPA1Q969W9 287 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 MVB12AQ96EY5 273 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 CHMP6Q96FZ7 201 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 CCNL2Q96S94 520 aaPredicted RBP13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 MRPL57Q9BQC6 102 aaKnown RBP13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 NDC1Q9BTX1 674 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 EHD1Q9H4M9 534 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 PELI2Q9HAT8 420 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 NKIRAS1Q9NYS0 192 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 KCND3Q9UK17 655 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 ASPMQ8IZT6 3477 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 ANKRD12Q6UB98 2062 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 SDK2Q58EX2 2172 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 APC2O95996 2303 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 NDUFAB1O14561 156 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 CTSVO60911 334 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 RFPL1O75677 317 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 RECKO95980 971 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 AGXTP21549 392 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 STAT5AP42229 794 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 PIK3CGP48736 1102 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 ALDH18A1P54886 795 aaKnown RBP13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 TMPRSS3P57727 454 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 TLE3Q04726 772 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 PCDH1Q08174 1060 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 ZXDCQ2QGD7 858 aaPredicted RBP13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 CRTC2Q53ET0 693 aaPredicted RBP13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 TECRLQ5HYJ1 363 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 TTLQ8NG68 377 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 CLIP3Q96DZ5 547 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 GPR78Q96P69 363 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 OR2A5Q96R48 311 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 OR4K3Q96R72 315 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 GPR87Q9BY21 358 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 MRPL46Q9H2W6 279 aaKnown RBP13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 MLXIPLQ9NP71 852 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 LHX9Q9NQ69 397 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 TXLNGQ9NUQ3 528 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 IRAK4Q9NWZ3 460 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 DCDC2Q9UHG0 476 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 SLC22A14Q9Y267 594 aa13.39□□□□□ -0.27
PKNOX1-209ENST00000560448 URB1O60287 2271 aaKnown RBP13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 AKAP13Q12802 2813 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 HEATR5BQ9P2D3 2071 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 AHCTF1Q8WYP5 2266 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 NCF1BA6NI72 391 aaPredicted RBP13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 NCF1CA8MVU1 366 aaPredicted RBP13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 SUPT3HB4E1H0 165 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 H7BY64 318 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 MEN1O00255 615 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 ZNF749O43361 778 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 SUPT3HO75486 399 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 WDR47O94967 919 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 ZWINTO95229 277 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 TIAF1O95411 115 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 PIM1P11309 404 aaPredicted RBP13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 MTHFD2P13995 350 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 NCF1P14598 390 aaPredicted RBP13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 RORAP35398 523 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 CSNK1G2P78368 415 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 IRF9Q00978 393 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 MC1RQ01726 317 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 CDC16Q13042 620 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 SETDB1Q15047 1291 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 MUM1Q2TAK8 710 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 DEFB110Q30KQ9 67 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 NIPAL1Q6NVV3 410 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 FBXO42Q6P3S6 717 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 FAM20CQ8IXL6 584 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 LRRC34Q8IZ02 419 aa13.38□□□□□ -0.27
PKNOX1-209ENST00000560448 DSELQ8IZU8 1212 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms