RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 ICAM4Q14773 271 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 PTPRRQ15256 657 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 UGP2Q16851 508 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 LEXMQ3ZCV2 418 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 DNAL1Q4LDG9 190 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 TAF1BQ53T94 588 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-216ENST00000559496 ZNF805Q5CZA5 627 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 C9orf64Q5T6V5 341 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 GRTP1Q5TC63 336 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 ZNF470Q6ECI4 717 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 AFTPHQ6ULP2 937 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 FAM47EQ6ZV65 393 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 PTAR1Q7Z6K3 402 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-216ENST00000559496 CLNKQ7Z7G1 428 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 RALGPS2Q86X27 583 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-216ENST00000559496 TMPRSS6Q8IU80 811 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 CNTN4Q8IWV2 1026 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 STK40Q8N2I9 435 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 SLC44A3Q8N4M1 653 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 AFAP1L2Q8N4X5 818 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 ICA1LQ8NDH6 482 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 OR4K2Q8NGD2 314 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 OR13C4Q8NGS5 318 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 OR8D1Q8WZ84 308 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 ZNF75CPQ92670 426 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-216ENST00000559496 DNASE1L2Q92874 299 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 VOPP1Q96AW1 172 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 MTBPQ96DY7 904 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 LRIG1Q96JA1 1093 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 TBATAQ96M53 351 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 VPS35Q96QK1 796 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 RBBP8Q99708 897 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 COQ7Q99807 217 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 MROQ9BYG7 248 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 PAIP1Q9H074 479 aaKnown RBP6.83□□□□□ -1.32
ZEB1-216ENST00000559496 TMEM245Q9H330 911 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 MFSD1Q9H3U5 465 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 C8orf33Q9H7E9 229 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-216ENST00000559496 SCPEP1Q9HB40 452 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 FBRSL1Q9HCM7 1045 aaKnown RBP6.83□□□□□ -1.32
ZEB1-216ENST00000559496 C8orf4Q9NR00 106 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 NLE1Q9NVX2 485 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-216ENST00000559496 THAP10Q9P2Z0 257 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-216ENST00000559496 MOSPD1Q9UJG1 213 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 FBXO5Q9UKT4 447 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 FAM50BQ9Y247 325 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 PKP3Q9Y446 797 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 PIAS3Q9Y6X2 628 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 TCF20Q9UGU0 1960 aaKnown RBP6.83□□□□□ -1.32
ZEB1-216ENST00000559496 CDH23Q9H251 3354 aa6.83□□□□□ -1.32
ZEB1-216ENST00000559496 A0A0B4J203 849 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 A0A0U1RQS6 177 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 A0A1W2PPM1 405 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 TSPAN11A1L157 253 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 OR51F1A6NGY5 319 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 NPIPB15A6NHN6 443 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 KPNA3O00505 521 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 NPC1O15118 1278 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 POLR1CO15160 346 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 YKT6O15498 198 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 EDF1O60869 148 aaKnown RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 CBX6O95503 412 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 CNOT4O95628 575 aaKnown RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 GOT2P00505 430 aaKnown RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 CTSLP07711 333 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 F7P08709 466 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 CYP2A6P11509 494 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 HNRNPLP14866 589 aaKnown RBP eCLIP6.82□□□□□ -1.322e-7■■□□□ 13.3
ZEB1-216ENST00000559496 BRAFP15056 766 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 CREB1P16220 341 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 PRKACAP17612 351 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 TNFRSF1AP19438 455 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 PSMA3P25788 255 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 TTKP33981 857 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 HMGCLP35914 325 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 HADHAP40939 763 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 ABCG1P45844 678 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 LIMK2P53671 638 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 OLR1P78380 273 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 MPP1Q00013 466 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 IFITM2Q01629 132 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 PPARDQ03181 441 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 SF3A3Q12874 501 aaKnown RBP eCLIP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 CTBP1Q13363 440 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 USP10Q14694 798 aaKnown RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 OXA1LQ15070 435 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 NPTX1Q15818 432 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 TRIM16LQ309B1 348 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 LSM12Q3MHD2 195 aaKnown RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 POM121L1PQ3SYA9 428 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 CCDC58Q4VC31 144 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 MRNIPQ6NTE8 343 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 FIP1L1Q6UN15 594 aaKnown RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 KIAA0408Q6ZU52 694 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 TPRG1Q6ZUI0 275 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 LPCAT2Q7L5N7 544 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 KRT77Q7Z794 578 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 DSG4Q86SJ6 1040 aa6.82□□□□□ -1.32
ZEB1-216ENST00000559496 ZC3HC1Q86WB0 502 aaKnown RBP6.82□□□□□ -1.32
ZEB1-216ENST00000559496 DENND6AQ8IWF6 608 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms