RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 UBE2E3Q969T4 207 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 ZDHHC12Q96GR4 267 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 TGM7Q96PF1 710 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 FRG2BQ96QU4 278 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 NUF2Q9BZD4 464 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 SEMA6CQ9H3T2 930 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 ELOVL6Q9H5J4 265 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 NT5DC2Q9H857 520 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 C1GALT1Q9NS00 363 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 FARSBQ9NSD9 589 aaKnown RBP17.36■□□□□ 0.37
CLPX-203ENST00000558958 ANKMY1Q9P2S6 941 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 FTSJ1Q9UET6 329 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 BTRCQ9Y297 605 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 HEATR5BQ9P2D3 2071 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 TRPC5OSA6NMA1 111 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 PIP5K1BO14986 540 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 CASC3O15234 703 aaKnown RBP17.35■□□□□ 0.37
CLPX-203ENST00000558958 NRP2O60462 931 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 CBFA2T3O75081 653 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 PVRP15151 417 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 CDH3P22223 829 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 ACP1P24666 158 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 CSF2RBP32927 897 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 CCL7P80098 99 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 IFT88Q13099 833 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 ABRAXAS2Q15018 415 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 VWA5B1Q5TIE3 1220 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 FCRL6Q6DN72 434 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 EPGNQ6UW88 154 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 FAM92BQ6ZTR7 304 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 USP53Q70EK8 1073 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 PLXDC1Q8IUK5 500 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 DDIASQ8IXT1 998 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 BAHD1Q8TBE0 780 aaPredicted RBP17.35■□□□□ 0.37
CLPX-203ENST00000558958 REPS1Q96D71 796 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 C19orf60Q96EN9 201 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 PHOX2BQ99453 314 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 CD180Q99467 661 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 MAP3K3Q99759 626 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 CCT7Q99832 543 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 SARGQ9BW04 601 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 MEAF6Q9HAF1 191 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 TSC22D4Q9Y3Q8 395 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 PTGDR2Q9Y5Y4 395 aa17.35■□□□□ 0.37
CLPX-203ENST00000558958 MN1Q10571 1320 aaPredicted RBP17.34■□□□□ 0.37
CLPX-203ENST00000558958 A0A0G2JND7 137 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 A0A1W2PQM1 296 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 TRBC2A0A5B9 178 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 FEZF1A0PJY2 475 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 TLCD2A6NGC4 264 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 HAT1O14929 419 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 KIF1CO43896 1103 aaKnown RBP17.34■□□□□ 0.37
CLPX-203ENST00000558958 PDYNP01213 254 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 C9P02748 559 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 LINC00032P0C843 101 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 GRK3P35626 688 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 NEK2P51955 445 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 ZNF33BQ06732 778 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 SGO1Q5FBB7 561 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 C10orf62Q5T681 223 aaPredicted RBP17.34■□□□□ 0.37
CLPX-203ENST00000558958 SCIMPQ6UWF3 145 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 ASCL5Q7RTU5 278 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 PLD3Q8IV08 490 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 BCAS4Q8TDM0 211 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 SELENOMQ8WWX9 145 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 MTFMTQ96DP5 389 aaKnown RBP17.34■□□□□ 0.37
CLPX-203ENST00000558958 TRAPPC9Q96Q05 1148 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 KLHL25Q9H0H3 589 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 LRRN3Q9H3W5 708 aa17.34■□□□□ 0.37
CLPX-203ENST00000558958 ZFHX2Q9C0A1 2572 aaPredicted RBP17.33■□□□□ 0.37
CLPX-203ENST00000558958 SERTM1A2A2V5 107 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 LCMT2O60294 686 aaKnown RBP17.33■□□□□ 0.37
CLPX-203ENST00000558958 RPLP0P05388 317 aaKnown RBP17.33■□□□□ 0.37
CLPX-203ENST00000558958 GP1BAP07359 652 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 PCNAP12004 261 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 EZRP15311 586 aaKnown RBP17.33■□□□□ 0.37
CLPX-203ENST00000558958 ST6GAL1P15907 406 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 SCTRP47872 440 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 IDH3AP50213 366 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 NHLH1Q02575 133 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 RELAQ04206 551 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 RBBP5Q15291 538 aaKnown RBP17.33■□□□□ 0.37
CLPX-203ENST00000558958 ZIC1Q15915 447 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 SLC9B1Q4ZJI4 515 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 XKR7Q5GH72 579 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 STPG1Q5TH74 334 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 ADNP2Q6IQ32 1131 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 TRIM46Q7Z4K8 759 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 CARFQ8N187 725 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 ANKRD53Q8N9V6 530 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 HUS1BQ8NHY5 278 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 ZNF473Q8WTR7 871 aaKnown RBP17.33■□□□□ 0.37
CLPX-203ENST00000558958 C10orf82Q8WW14 230 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 PPP1R36Q96LQ0 422 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 C3orf30Q96M34 536 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 HBEGFQ99075 208 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 MTERF1Q99551 399 aaKnown RBP17.33■□□□□ 0.37
CLPX-203ENST00000558958 EBF4Q9BQW3 602 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 NUDT22Q9BRQ3 303 aa17.33■□□□□ 0.37
CLPX-203ENST00000558958 TMEM120AQ9BXJ8 343 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms