RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PSD2Q9BQI7 771 aa4.01□□□□□ -1.77
CASC4-206ENST00000558847 IDI2Q9BXS1 227 aa4.01□□□□□ -1.77
CASC4-206ENST00000558847 RIMS4Q9H426 269 aaPredicted RBP4.01□□□□□ -1.77
CASC4-206ENST00000558847 CWC25Q9NXE8 425 aaPredicted RBP4.01□□□□□ -1.77
CASC4-206ENST00000558847 OR6C2Q9NZP2 312 aa4.01□□□□□ -1.77
CASC4-206ENST00000558847 MAD2L2Q9UI95 211 aa4.01□□□□□ -1.77
CASC4-206ENST00000558847 AGTPBP1Q9UPW5 1226 aa4.01□□□□□ -1.77
CASC4-206ENST00000558847 PFASO15067 1338 aa4□□□□□ -1.77
CASC4-206ENST00000558847 TRIP12Q14669 1992 aaPredicted RBP4□□□□□ -1.77
CASC4-206ENST00000558847 PRSS44E7EML9 344 aa4□□□□□ -1.77
CASC4-206ENST00000558847 HTATSF1O43719 755 aaKnown RBP4□□□□□ -1.77
CASC4-206ENST00000558847 ZBTB14O43829 449 aa4□□□□□ -1.77
CASC4-206ENST00000558847 SLC22A3O75751 556 aa4□□□□□ -1.77
CASC4-206ENST00000558847 CDK2AP2O75956 126 aa4□□□□□ -1.77
CASC4-206ENST00000558847 TSHBP01222 138 aa4□□□□□ -1.77
CASC4-206ENST00000558847 ANKRD34CP0C6C1 535 aa4□□□□□ -1.77
CASC4-206ENST00000558847 SP9P0CG40 484 aa4□□□□□ -1.77
CASC4-206ENST00000558847 CD27P26842 260 aa4□□□□□ -1.77
CASC4-206ENST00000558847 MARK3P27448 753 aa4□□□□□ -1.77
CASC4-206ENST00000558847 CEACAM8P31997 349 aaPredicted RBP4□□□□□ -1.77
CASC4-206ENST00000558847 DCTP40126 519 aa4□□□□□ -1.77
CASC4-206ENST00000558847 NT5C2P49902 561 aa4□□□□□ -1.77
CASC4-206ENST00000558847 ERVFC1-1P60608 527 aa4□□□□□ -1.77
CASC4-206ENST00000558847 RPL36AP83881 106 aaKnown RBP4□□□□□ -1.77
CASC4-206ENST00000558847 SLC34A1Q06495 639 aa4□□□□□ -1.77
CASC4-206ENST00000558847 AP1B1Q10567 949 aa4□□□□□ -1.77
CASC4-206ENST00000558847 SGCGQ13326 291 aa4□□□□□ -1.77
CASC4-206ENST00000558847 ACKR1Q16570 336 aa4□□□□□ -1.77
CASC4-206ENST00000558847 SLC39A12Q504Y0 691 aa4□□□□□ -1.77
CASC4-206ENST00000558847 FGD3Q5JSP0 725 aa4□□□□□ -1.77
CASC4-206ENST00000558847 WDR38Q5JTN6 314 aa4□□□□□ -1.77
CASC4-206ENST00000558847 SLC35E4Q6ICL7 350 aa4□□□□□ -1.77
CASC4-206ENST00000558847 ETFRF1Q6IPR1 90 aa4□□□□□ -1.77
CASC4-206ENST00000558847 PLBD1Q6P4A8 553 aa4□□□□□ -1.77
CASC4-206ENST00000558847 PRSS55Q6UWB4 352 aaPredicted RBP4□□□□□ -1.77
CASC4-206ENST00000558847 IL17RELQ6ZVW7 336 aa4□□□□□ -1.77
CASC4-206ENST00000558847 PRUNE1Q86TP1 453 aa4□□□□□ -1.77
CASC4-206ENST00000558847 ZNF444Q8N0Y2 327 aaPredicted RBP4□□□□□ -1.77
CASC4-206ENST00000558847 STPG4Q8N801 248 aa4□□□□□ -1.77
CASC4-206ENST00000558847 ZNF383Q8NA42 475 aa4□□□□□ -1.77
CASC4-206ENST00000558847 KLHDC9Q8NEP7 349 aa4□□□□□ -1.77
CASC4-206ENST00000558847 BCL2L2Q92843 193 aaPredicted RBP4□□□□□ -1.77
CASC4-206ENST00000558847 AP2M1Q96CW1 435 aa4□□□□□ -1.77
CASC4-206ENST00000558847 LMLNQ96KR4 655 aa4□□□□□ -1.77
CASC4-206ENST00000558847 C4orf45Q96LM5 186 aa4□□□□□ -1.77
CASC4-206ENST00000558847 CTAGE1Q96RT6 745 aa4□□□□□ -1.77
CASC4-206ENST00000558847 CDCA3Q99618 268 aaPredicted RBP4□□□□□ -1.77
CASC4-206ENST00000558847 RPF1Q9H9Y2 349 aaKnown RBP4□□□□□ -1.77
CASC4-206ENST00000558847 ZNF556Q9HAH1 456 aa4□□□□□ -1.77
CASC4-206ENST00000558847 ZNF334Q9HCZ1 680 aaPredicted RBP4□□□□□ -1.77
CASC4-206ENST00000558847 ZFP57Q9NU63 452 aa4□□□□□ -1.77
CASC4-206ENST00000558847 NOCTQ9UK39 431 aaKnown RBP4□□□□□ -1.77
CASC4-206ENST00000558847 TNNQ9UQP3 1299 aa4□□□□□ -1.77
CASC4-206ENST00000558847 RPGRIP1LQ68CZ1 1315 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 FAM72CH0Y354 149 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 P2RY10O00398 339 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 PCDH7O60245 1069 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 PRDM1O75626 825 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 OLFM2O95897 454 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 LHCGRP22888 699 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 ANOS1P23352 680 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 SSTR1P30872 391 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 CLDN17P56750 224 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 B3GALT5-AS1P59052 145 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 RPP38P78345 283 aaKnown RBP3.99□□□□□ -1.77
CASC4-206ENST00000558847 PHEXP78562 749 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 CDR2Q01850 454 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 CBX3Q13185 183 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 HERC3Q15034 1050 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 MAPK11Q15759 364 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 STXBP2Q15833 593 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 AARDQ4LEZ3 155 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 IFI44LQ53G44 452 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 CCDC92Q53HC0 331 aaPredicted RBP3.99□□□□□ -1.77
CASC4-206ENST00000558847 XKR6Q5GH73 641 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 FAM72AQ5TYM5 149 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 FAM72DQ6L9T8 149 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 UGT3A1Q6NUS8 523 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 ALKBH5Q6P6C2 394 aaKnown RBP3.99□□□□□ -1.77
CASC4-206ENST00000558847 RBMS3Q6XE24 437 aaKnown RBP3.99□□□□□ -1.77
CASC4-206ENST00000558847 MACC1Q6ZN28 852 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 MARK2Q7KZI7 788 aaKnown RBP3.99□□□□□ -1.77
CASC4-206ENST00000558847 FAM72BQ86X60 149 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 CROCCP3Q8IVE0 287 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 APCDD1Q8J025 514 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 FAM89BQ8N5H3 189 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 KIAA0895Q8NCT3 520 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 SUSD6Q92537 303 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 GIMAP5Q96F15 307 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 UHRF2Q96PU4 802 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 GAL3ST4Q96RP7 486 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 MMP28Q9H239 520 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 CUEDC2Q9H467 287 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 DONSONQ9NYP3 566 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 HMG20BQ9P0W2 317 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 KCNG2Q9UJ96 466 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 RIPK3Q9Y572 518 aa3.99□□□□□ -1.77
CASC4-206ENST00000558847 KLK4Q9Y5K2 254 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms