RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 PRR30Q53SZ7 412 aaPredicted RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 ESCO2Q56NI9 601 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 ZRANB3Q5FWF4 1079 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 XKR4Q5GH76 650 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 FAM69AQ5T7M9 428 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 NAA35Q5VZE5 725 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 FAM205BPQ63HN1 556 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 TMEM198Q66K66 360 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 LRRC8EQ6NSJ5 796 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 ASB18Q6ZVZ8 466 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 Q71RC1 249 aaPredicted RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 NOXA1Q86UR1 476 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 PHC2Q8IXK0 858 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 NAGSQ8N159 534 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 FBXO39Q8N4B4 442 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 GJC3Q8NFK1 279 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 ARRDC2Q8TBH0 407 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 NOC3LQ8WTT2 800 aaKnown RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 APOBEC4Q8WW27 367 aaKnown RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 TCP11Q8WWU5 503 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 ZMAT2Q96NC0 199 aaKnown RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 UBAC1Q9BSL1 405 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 NFKBIZQ9BYH8 718 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 AGXT2Q9BYV1 514 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 PAIP1Q9H074 479 aaKnown RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 OLA1Q9NTK5 396 aaKnown RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 SEC63Q9UGP8 760 aaKnown RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 PROCRQ9UNN8 238 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 STON1Q9Y6Q2 735 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 CCDC196A0A1B0GTZ2 297 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 FAM170AA1A519 330 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 C10orf142B7Z368 130 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 SLC9A3R1O14745 358 aaPredicted RBP5.6□□□□□ -1.51
RTF1-204ENST00000558117 TIMM23O14925 209 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 KLK8O60259 260 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 USO1O60763 962 aaKnown RBP5.6□□□□□ -1.51
RTF1-204ENST00000558117 SERPINI2O75830 405 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 HEXAP06865 529 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 HAPLN1P10915 354 aaPredicted RBP5.6□□□□□ -1.51
RTF1-204ENST00000558117 ACADMP11310 421 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 FGF3P11487 239 aaPredicted RBP5.6□□□□□ -1.51
RTF1-204ENST00000558117 COX7A2P14406 83 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 C21orf33P30042 268 aaPredicted RBP5.6□□□□□ -1.51
RTF1-204ENST00000558117 PDLIM4P50479 330 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 MXI1P50539 228 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 ZNF132P52740 706 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 NAP1L1P55209 391 aaKnown RBP5.6□□□□□ -1.51
RTF1-204ENST00000558117 DSCR9P59020 149 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 EIF3IQ13347 325 aaKnown RBP5.6□□□□□ -1.51
RTF1-204ENST00000558117 ENPP2Q13822 863 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 MXD4Q14582 209 aaPredicted RBP5.6□□□□□ -1.51
RTF1-204ENST00000558117 EMC2Q15006 297 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 C14orf28Q4W4Y0 310 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 EFHC1Q5JVL4 640 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 ALKAL1Q6UXT8 129 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 CREB3L2Q70SY1 520 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 CACUL1Q86Y37 369 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 PARP16Q8N5Y8 322 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 ANKRD52Q8NB46 1076 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 C11orf65Q8NCR3 313 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 RDM1Q8NG50 284 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 OR10T2Q8NGX3 314 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 FAM216AQ8WUB2 273 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 UCMAQ8WVF2 138 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 SNAPC3Q92966 411 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 OTULINQ96BN8 352 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 ZC3HAV1LQ96H79 300 aaKnown RBP5.6□□□□□ -1.51
RTF1-204ENST00000558117 TXNDC15Q96J42 360 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 PREBQ9HCU5 417 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 XPNPEP1Q9NQW7 623 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 CYSLTR2Q9NS75 346 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 C20orf141Q9NUB4 165 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 IRAK4Q9NWZ3 460 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 PAM16Q9Y3D7 125 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 LRP12Q9Y561 859 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 A3GALT2U3KPV4 340 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 CKAP5Q14008 2032 aa5.6□□□□□ -1.51
RTF1-204ENST00000558117 TEX13CA0A0J9YWL9 993 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 A0A1W2PPH5 198 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 SYNDIG1LA6NDD5 238 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 TSPAN4O14817 238 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 DUX1O43812 170 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 AHCYL1O43865 530 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 KCNJ13O60928 360 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 NOL4O94818 638 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 CSH1P0DML2 217 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 CSH2P0DML3 217 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 FCGR1AP12314 374 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 LIFP15018 202 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 ITGAXP20702 1163 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 DGKAP23743 735 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 SSTR2P30874 369 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 PIGAP37287 484 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 HARS2P49590 506 aaKnown RBP5.59□□□□□ -1.51
RTF1-204ENST00000558117 TFDP1Q14186 410 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 NFATC4Q14934 902 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 IZUMO4Q1ZYL8 232 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 SLC39A12Q504Y0 691 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 HIST2H2BDQ6DRA6 164 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 H1FNTQ75WM6 255 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms