RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ARG2P78540 354 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 HSP90AA5PQ58FG0 334 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 UGT3A1Q6NUS8 523 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 FAM180AQ6UWF9 173 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 MAMDC2Q7Z304 686 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-235ENST00000557740 LAPTM4BQ86VI4 370 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 PALM2Q8IXS6 379 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 AGGF1Q8N302 714 aaeCLIP13.9□□□□□ -0.18
SHMT2-235ENST00000557740 MCOLN3Q8TDD5 553 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 GRHL3Q8TE85 626 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 SIGLEC10Q96LC7 697 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 LMF1Q96S06 567 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 AARSD1Q9BTE6 412 aaKnown RBP13.9□□□□□ -0.18
SHMT2-235ENST00000557740 SYNPO2LQ9H987 977 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 IARS2Q9NSE4 1012 aaKnown RBP13.9□□□□□ -0.18
SHMT2-235ENST00000557740 PTGFRNQ9P2B2 879 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 IGHV1-45A0A0A0MS14 117 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 A0A1W2PQ72 361 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 H7BY64 318 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 FOXS1O43638 330 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 HAUS5O94927 633 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 STATHP02808 62 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 SERPINA7P05543 415 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 RPS15AP62244 130 aaKnown RBP13.89□□□□□ -0.19
SHMT2-235ENST00000557740 AP2B1P63010 937 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 MAT1AQ00266 395 aaKnown RBP13.89□□□□□ -0.19
SHMT2-235ENST00000557740 SP140Q13342 867 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 FAM53BQ14153 422 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 CRYMQ14894 314 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 SYT16Q17RD7 645 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 RNASEH2BQ5TBB1 312 aaKnown RBP13.89□□□□□ -0.19
SHMT2-235ENST00000557740 CYHR1Q6ZMK1 362 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 SPNS2Q8IVW8 549 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 ZC3H7AQ8IWR0 971 aaKnown RBP13.89□□□□□ -0.19
SHMT2-235ENST00000557740 LRRC56Q8IYG6 542 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-235ENST00000557740 ACTRT1Q8TDG2 376 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 BRIX1Q8TDN6 353 aaKnown RBP13.89□□□□□ -0.19
SHMT2-235ENST00000557740 MAGEB10Q96LZ2 347 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-235ENST00000557740 PRAP1Q96NZ9 151 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 OSBPL9Q96SU4 736 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 NDNQ99608 321 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 TGIF2Q9GZN2 237 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 PCBD2Q9H0N5 130 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 TMEM184CQ9NVA4 438 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 TAS2R13Q9NYV9 303 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 ASIC3Q9UHC3 531 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 MKL2Q9ULH7 1088 aa13.89□□□□□ -0.19
SHMT2-235ENST00000557740 POLEQ07864 2286 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 PABPN1LA6NDY0 278 aaKnown RBP13.88□□□□□ -0.19
SHMT2-235ENST00000557740 WFS1O76024 890 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 KLHL18O94889 574 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 BMP10O95393 424 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 TTC4O95801 387 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 C8GP07360 202 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 SOX11P35716 441 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 MFSD4BQ5TF39 518 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 RIPOR1Q6ZS17 1223 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 MYO1HQ8N1T3 1032 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 SLC35F6Q8N357 371 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 ARHGEF39Q8N4T4 335 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 SIRT6Q8N6T7 355 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 C2CD4AQ8NCU7 369 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-235ENST00000557740 OR1N1Q8NGS0 311 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 FAR1Q8WVX9 515 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 METTL21AQ8WXB1 218 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 CCDC138Q96M89 665 aa13.88□□□□□ -0.19
SHMT2-235ENST00000557740 MRPS2Q9Y399 296 aaKnown RBP13.88□□□□□ -0.19
SHMT2-235ENST00000557740 TRAV17A0A0B4J275 112 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 WIPF3A6NGB9 483 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 E2F3O00716 465 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 C8orf89P0DMQ9 161 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 EDN3P14138 238 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 MBOAT1Q6ZNC8 495 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 VN1R4Q7Z5H5 301 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 C17orf64Q86WR6 236 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 BCORP1Q8N888 145 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 CAMKVQ8NCB2 501 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 CATSPER1Q8NEC5 780 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 OR9A4Q8NGU2 314 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 EEF1AKMT1Q8WVE0 214 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 ALKBH8Q96BT7 664 aaKnown RBP13.87□□□□□ -0.19
SHMT2-235ENST00000557740 THAP11Q96EK4 314 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 LINGO1Q96FE5 620 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 ZNF700Q9H0M5 742 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 PARVBQ9HBI1 364 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 OLAHQ9NV23 265 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 ADAMTS6Q9UKP5 1117 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 PDE10AQ9Y233 779 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 OSGIN2Q9Y236 505 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 DOCK10Q96BY6 2186 aa13.87□□□□□ -0.19
SHMT2-235ENST00000557740 TEX15Q9BXT5 2789 aa13.86□□□□□ -0.19
SHMT2-235ENST00000557740 KCNE1BA0A087WTH5 132 aa13.86□□□□□ -0.19
SHMT2-235ENST00000557740 LOC102723996A0A087X1L8 192 aa13.86□□□□□ -0.19
SHMT2-235ENST00000557740 H0YIG0 161 aa13.86□□□□□ -0.19
SHMT2-235ENST00000557740 DNALI1O14645 258 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-235ENST00000557740 ZSCAN12O43309 604 aa13.86□□□□□ -0.19
SHMT2-235ENST00000557740 BANF1O75531 89 aa13.86□□□□□ -0.19
SHMT2-235ENST00000557740 NSA2O95478 260 aaKnown RBP13.86□□□□□ -0.19
SHMT2-235ENST00000557740 CLDN1O95832 211 aa13.86□□□□□ -0.19
SHMT2-235ENST00000557740 CELA2AP08217 269 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms